Orthologous regulated operons containing rhiL gene

Properties
Regulog:	RhiR - Rhizobiales
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:
Biological process:	Rhamnogalacturonides utilization
Effector:	Rhamogalacturonate oligosaccharides
Phylum:	Proteobacteria/Alpha

Built upon 16 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Agrobacterium tumefaciens str. C58 (Cereon)
Position: -171 Score: 6.24835 Sequence: TAATGAAATTATTTTCACGA Position: -31 Score: 6.22034 Sequence: TTGTGAAAATGTTTTCATTG Locus tag: Atu4564 Name: rhiL Funciton: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
rhiL	-171	6.2	TAATGAAATTATTTTCACGA	Atu4564
	-31	6.2	TTGTGAAAATGTTTTCATTG
Rhizobium etli CFN 42
Position: -171 Score: 5.93598 Sequence: GCATGAAAATCTTTTCATTC Position: -30 Score: 6.19535 Sequence: TGATGAAAATGTTTTCATGG Locus tag: RHE_PF00297 Name: rhiL Funciton: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
rhiL	-171	5.9	GCATGAAAATCTTTTCATTC	RHE_PF00297
	-30	6.2	TGATGAAAATGTTTTCATGG
Rhizobium leguminosarum bv. viciae 3841
Position: -164 Score: 6.53264 Sequence: CTATGAAAATATTTTCATTA Position: -24 Score: 6.45561 Sequence: TAATGAAAATGTTTTCATGG Locus tag: pRL120685 Name: rhiL Funciton: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
rhiL	-164	6.5	CTATGAAAATATTTTCATTA	pRL120685
	-24	6.5	TAATGAAAATGTTTTCATGG
Rhizobium sp. NGR234
Position: -175 Score: 5.99589 Sequence: GTATGAAAATGTTTTCATCA Position: -32 Score: 5.90161 Sequence: TTATGAAAAAGTTTTCATGA Locus tag: NGR_b17670 Name: rhiL Funciton: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
rhiL	-175	6	GTATGAAAATGTTTTCATCA	NGR_b17670
	-32	5.9	TTATGAAAAAGTTTTCATGA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --