Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing socD gene

Properties
Regulog: SocR - Rhizobiales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Santhopine utilization
Effector: Mannopine; Deoxyfructosyl glutamine
Phylum: Proteobacteria/Alpha
Built upon 12 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Agrobacterium tumefaciens str. C58 (Cereon)
Position: -162
Score: 6.2698
Sequence: CAAAGAGACCGGTCTCATTC
Position: -141
Score: 6.0005
Sequence: CATTGAGACCGGTCTCAGTA
Locus tag: Atu5006
Name: socA
Funciton: Deoxyfructosyl glutamine and mannopine ABC transporter, periplasmic amino acid-binding protein
Locus tag: Atu5005
Name: socB
Funciton: Deoxyfructosyl glutamine and mannopine ABC transporter, ATP-binding protein fused to permease component
Locus tag: Atu5004
Name: socC
Funciton: NAD-depending oxidoreductase involved in deoxyfructosyl glutamine utilization
Locus tag: Atu5003
Name: socD
Funciton: Fructosyl-amino acid oxidase (EC 1.5.3.-)
socA-socB-socC-socD -162 6.3 CAAAGAGACCGGTCTCATTC Atu5006
-141 6 CATTGAGACCGGTCTCAGTA
Rhizobium etli CFN 42
Position: -126
Score: 5.95688
Sequence: TCGTGAGACCGGTCTCTTTT
Position: -105
Score: 5.39161
Sequence: ATTGGAGACCGGTATCATTG
Locus tag: RHE_PF00255
Name: socA
Funciton: Deoxyfructosyl glutamine and mannopine ABC transporter, periplasmic amino acid-binding protein
Locus tag: RHE_PF00254
Name: socB
Funciton: Deoxyfructosyl glutamine and mannopine ABC transporter, ATP-binding protein fused to permease component
Locus tag: RHE_PF00253
Name: socD
Funciton: Fructosyl-amino acid oxidase (EC 1.5.3.-)
socA-socB-socD -126 6 TCGTGAGACCGGTCTCTTTT RHE_PF00255
-105 5.4 ATTGGAGACCGGTATCATTG
Rhizobium leguminosarum bv. viciae 3841
Position: -125
Score: 6.1339
Sequence: TTGTGAGACCGGTCTCTTTA
Position: -104
Score: 5.43642
Sequence: ATCAGAGACCGGTATCTTGT
Locus tag: pRL120733
Name: socA
Funciton: Deoxyfructosyl glutamine and mannopine ABC transporter, periplasmic amino acid-binding protein
Locus tag: pRL120734
Name: socB
Funciton: Deoxyfructosyl glutamine and mannopine ABC transporter, ATP-binding protein fused to permease component
Locus tag: pRL120735
Name: socD
Funciton: Fructosyl-amino acid oxidase (EC 1.5.3.-)
socA-socB-socD -125 6.1 TTGTGAGACCGGTCTCTTTA pRL120733
-104 5.4 ATCAGAGACCGGTATCTTGT