Orthologous regulated operons containing hypD gene
| Regulog: | HypR - Alteromonadales |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | activator (repressor) |
| Biological process: | Proline and 4-hydrohyproline utilization |
| Effector: | Proline; 4-hydroxyproline |
| Phylum: | Proteobacteria/gamma |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Alteromonadales bacterium TW-7 | ||||
|
Position: -45
Score: 4.7364 Sequence: ACTGTATACAAT
Locus tag: ATW7_13098
Name: hypD Funciton: 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) # predicted |
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| hypD | -45 | 4.7 | ACTGTATACAAT | ATW7_13098 |
| Colwellia psychrerythraea 34H | ||||
|
Position: -100
Score: 5.32149 Sequence: ATTGTATACAAT
Locus tag: CPS_1449
Name: hypD Funciton: 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) # predicted
Locus tag: CPS_1450
Name: hypE Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8) |
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| hypD-hypE | -100 | 5.3 | ATTGTATACAAT | CPS_1449 |
| Pseudoalteromonas tunicata D2 | ||||
|
Position: -65
Score: 5.01168 Sequence: ATTGCATACAAT
Locus tag: PTD2_14397
Name: hypD Funciton: 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) # predicted
Locus tag: PTD2_14402
Name: hypE Funciton: Proline racemase /4-hydroxyproline epimerase (EC 5.1.1.8)
Locus tag: PTD2_14407
Name: hypH Funciton: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) # hydroxy-L-proline-inducible
Locus tag: PTD2_14412
Name: hypR Funciton: Predicted regulator for proline and hydrohyproline utilization, GntR family |
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| hypD-hypE-hypH-hypR | -65 | 5 | ATTGCATACAAT | PTD2_14397 |