Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ntrY gene

Properties
Regulog: NtrC - Rhodospirillales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/alpha
Built upon 40 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Acetobacter pasteurianus IFO 3283-01
Position: -30
Score: 4.92869
Sequence: TGCCTAAATCATAGGCA
Locus tag: APA01_17530
Name: nifR3
Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family
Locus tag: APA01_17520
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: APA01_17510
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
Locus tag: APA01_17500
Name: ntrY
Funciton: Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-)
Locus tag: APA01_17490
Name: ntrX
Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family
nifR3-ntrB-ntrC-ntrY-ntrX -30 4.9 TGCCTAAATCATAGGCA APA01_17530
Gluconacetobacter diazotrophicus PAl 5
Position: -101
Score: 4.72724
Sequence: TGCTTAAATCCTGGGCA
Locus tag: Gdia_0487
Name: nifR3
Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family
Locus tag: Gdia_0486
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: Gdia_0485
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
Locus tag: Gdia_0484
Name: ntrY
Funciton: Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-)
Locus tag: Gdia_0483
Name: ntrX
Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family
nifR3-ntrB-ntrC-ntrY-ntrX -101 4.7 TGCTTAAATCCTGGGCA Gdia_0487
Granulibacter bethesdensis CGDNIH1
Position: -10
Score: 5.07339
Sequence: TGCCCAAATCATGGGCA
Locus tag: GbCGDNIH1_1228
Name: nifR3
Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family
Locus tag: GbCGDNIH1_1227
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: GbCGDNIH1_1226
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
Locus tag: GbCGDNIH1_1225
Name: ntrY
Funciton: Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-)
Locus tag: GbCGDNIH1_1224
Name: ntrX
Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family
nifR3-ntrB-ntrC-ntrY-ntrX -10 5.1 TGCCCAAATCATGGGCA GbCGDNIH1_1228
Magnetospirillum magneticum AMB-1
Position: -110
Score: 4.61715
Sequence: TGCATAATAAATACGCA
Locus tag: amb2365
Name: nifR3
Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family
Locus tag: amb2366
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: amb2367
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
Locus tag: amb2368
Name: ntrY
Funciton: Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-)
Locus tag: amb2369
Name: ntrX
Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family
nifR3-ntrB-ntrC-ntrY-ntrX -110 4.6 TGCATAATAAATACGCA amb2365
Magnetospirillum magnetotacticum MS-1
Position: -20
Score: 4.61715
Sequence: TGCATAATAAATACGCA
Locus tag: Magn03007966
Name: nifR3
Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family
Locus tag: Magn03007967
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: Magn03007968
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
Locus tag: Magn03007969
Name: ntrY
Funciton: Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-)
nifR3-ntrB-ntrC-ntrY -20 4.6 TGCATAATAAATACGCA Magn03007966
Rhodospirillum centenum SW
Position: -38
Score: 4.4764
Sequence: CGCCTAATTTTCATGCA
Locus tag: RC1_0127
Name: nifR3
Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family
Locus tag: RC1_0128
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: RC1_0129
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
Locus tag: RC1_0130
Name: ntrY
Funciton: Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-)
Locus tag: RC1_0131
Name: ntrX
Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family
nifR3-ntrB-ntrC-ntrY-ntrX -38 4.5 CGCCTAATTTTCATGCA RC1_0127
Rhodospirillum rubrum ATCC 11170
Position: -162
Score: 4.58672
Sequence: TGCCTAATATTTAACCA
Locus tag: Rru_A1676
Name: nifR3
Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family
Locus tag: Rru_A1677
Name: ntrB
Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-)
Locus tag: Rru_A1678
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
Locus tag: Rru_A1679
Name: ntrY
Funciton: Nitrogen regulation protein NtrY, sensor kinase (EC 2.7.3.-)
Locus tag: Rru_A1680
Name: ntrX
Funciton: Nitrogen assimilation transcriptional regulator NtrX, Fis family
nifR3-ntrB-ntrC-ntrY-ntrX -162 4.6 TGCCTAATATTTAACCA Rru_A1676
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