Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ureD gene

Properties
Regulog: NtrC - Rhodobacterales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/alpha
Built upon 92 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Jannaschia sp. CCS1
Position: -139
Score: 4.22005
Sequence: TGCCTGCGAATTAGGCA
Locus tag: Jann_1744
Name: ureD
Funciton: Urease accessory protein, UreD
Locus tag: Jann_1745
Name: ureA
Funciton: Urease, gamma subunit (EC 3.5.1.5)
Locus tag: Jann_1747
Name: ureB
Funciton: Urease, beta subunit (EC 3.5.1.5)
Locus tag: Jann_1748
Name: null
Funciton: protein of unknown function DUF1311
Locus tag: Jann_1749
Name: null
Funciton: Twin-arginine translocation pathway signal
Locus tag: Jann_1750
Name: PF02627
Funciton: Putative alkylhydroperoxidase
Locus tag: Jann_1751
Name: Jann_1751
Funciton: Hypothetical protein
Locus tag: Jann_1752
Name: ureC
Funciton: Urease, alpha subunit (EC 3.5.1.5)
Locus tag: Jann_1753
Name: Jann_1753
Funciton: Conserved hypothetical protein
Locus tag: Jann_1754
Name: ureE
Funciton: Urease accessory protein, UreE
Locus tag: Jann_1755
Name: ureF
Funciton: Urease accessory protein, UreF
Locus tag: Jann_1756
Name: ureG
Funciton: Urease accessory protein, UreG
ureD-ureA-ureB-Jann_1748-Jann_1749-PF02627-Jann_1751-ureC-Jann_1753-ureE-ureF-ureG -139 4.2 TGCCTGCGAATTAGGCA Jann_1744
Loktanella vestfoldensis SKA53
Position: -115
Score: 4.91933
Sequence: TGCCTGAATTTTAGGCA
Locus tag: SKA53_14866
Name: ureD
Funciton: Urease accessory protein, UreD
Locus tag: SKA53_14871
Name: ureA
Funciton: Urease, gamma subunit (EC 3.5.1.5)
Locus tag: SKA53_14876
Name: ureB
Funciton: Urease, beta subunit (EC 3.5.1.5)
Locus tag: SKA53_14881
Name: ureC
Funciton: Urease, alpha subunit (EC 3.5.1.5)
Locus tag: SKA53_14886
Name: TM1040_0383
Funciton: Conserved hypothetical protein
Locus tag: SKA53_14891
Name: ureE
Funciton: Urease accessory protein, UreE
Locus tag: SKA53_14896
Name: ureF
Funciton: Urease accessory protein, UreF
Locus tag: SKA53_14901
Name: ureG
Funciton: Urease accessory protein, UreG
ureD-ureA-ureB-ureC-TM1040_0383-ureE-ureF-ureG -115 4.9 TGCCTGAATTTTAGGCA SKA53_14866
Oceanicola batsensis HTCC2597
Position: -204
Score: 4.42083
Sequence: CGCCCGTATTTTGGGCA
Locus tag: OB2597_07075
Name: ureD
Funciton: Urease accessory protein, UreD
Locus tag: OB2597_07070
Name: ureA
Funciton: Urease, gamma subunit (EC 3.5.1.5)
Locus tag: OB2597_07060
Name: ureB
Funciton: Urease, beta subunit (EC 3.5.1.5)
Locus tag: OB2597_07055
Name: OB2597_07055
Funciton: Hypothetical protein
Locus tag: OB2597_07050
Name: ureC
Funciton: Urease, alpha subunit (EC 3.5.1.5)
Locus tag: OB2597_07045
Name: OB2597_07045
Funciton: Conserved hypothetical protein
Locus tag: OB2597_07040
Name: ureE
Funciton: Urease accessory protein, UreE
Locus tag: OB2597_07035
Name: ureF
Funciton: Urease accessory protein, UreF
Locus tag: OB2597_07030
Name: ureG
Funciton: Urease accessory protein, UreG
ureD-ureA-ureB-OB2597_07055-ureC-OB2597_07045-ureE-ureF-ureG -204 4.4 CGCCCGTATTTTGGGCA OB2597_07075
Oceanicola granulosus HTCC2516
Position: -66
Score: 3.90011
Sequence: CGCCCCATTATCGGGCG
Locus tag: OG2516_01044
Name: ureD
Funciton: Urease accessory protein, UreD
Locus tag: OG2516_01049
Name: ureA
Funciton: Urease, gamma subunit (EC 3.5.1.5)
Locus tag: OG2516_01054
Name: ureB
Funciton: Urease, beta subunit (EC 3.5.1.5)
Locus tag: OG2516_01059
Name: ureC
Funciton: Urease, alpha subunit (EC 3.5.1.5)
Locus tag: OG2516_01064
Name: ureE
Funciton: Urease accessory protein, UreE
Locus tag: OG2516_01069
Name: ureF
Funciton: Urease accessory protein, UreF
Locus tag: OG2516_01074
Name: ureG
Funciton: Urease accessory protein, UreG
ureD-ureA-ureB-ureC-ureE-ureF-ureG -66 3.9 CGCCCCATTATCGGGCG OG2516_01044
Rhodobacter sphaeroides 2.4.1
Position: -124
Score: 4.19692
Sequence: TGCCCGATCCTTGAGCG
Locus tag: RSP_0310
Name: ureD
Funciton: Urease accessory protein, UreD
Locus tag: RSP_0309
Name: ureA
Funciton: Urease, gamma subunit (EC 3.5.1.5)
Locus tag: RSP_0308
Name: ureB
Funciton: Urease, beta subunit (EC 3.5.1.5)
ureD-ureA-ureB -124 4.2 TGCCCGATCCTTGAGCG RSP_0310
Roseobacter sp. MED193
Position: -83
Score: 4.17543
Sequence: TGCCCAAAAGTTACGCA
Locus tag: MED193_07968
Name: ureD
Funciton: Urease accessory protein, UreD
Locus tag: MED193_07973
Name: ureA
Funciton: Urease, gamma subunit (EC 3.5.1.5)
Locus tag: MED193_07983
Name: ureB
Funciton: Urease, beta subunit (EC 3.5.1.5)
Locus tag: MED193_07988
Name: ureC
Funciton: Urease, alpha subunit (EC 3.5.1.5)
Locus tag: MED193_07993
Name: ureE
Funciton: Urease accessory protein, UreE
Locus tag: MED193_07998
Name: ureF
Funciton: Urease accessory protein, UreF
Locus tag: MED193_08003
Name: ureG
Funciton: Urease accessory protein, UreG
ureD-ureA-ureB-ureC-ureE-ureF-ureG -83 4.2 TGCCCAAAAGTTACGCA MED193_07968
Roseovarius sp. 217
Position: -120
Score: 3.87825
Sequence: TGCGCTAAAAATAGGCA
Locus tag: ROS217_05379
Name: ureD
Funciton: Urease accessory protein, UreD
Locus tag: ROS217_05374
Name: ureA
Funciton: Urease, gamma subunit (EC 3.5.1.5)
Locus tag: ROS217_05364
Name: ureB
Funciton: Urease, beta subunit (EC 3.5.1.5)
Locus tag: ROS217_05359
Name: ureC
Funciton: Urease, alpha subunit (EC 3.5.1.5)
Locus tag: ROS217_05354
Name: ureE
Funciton: Urease accessory protein, UreE
Locus tag: ROS217_05349
Name: ureF
Funciton: Urease accessory protein, UreF
Locus tag: ROS217_05344
Name: ureG
Funciton: Urease accessory protein, UreG
ureD-ureA-ureB-ureC-ureE-ureF-ureG -120 3.9 TGCGCTAAAAATAGGCA ROS217_05379
Silicibacter TM1040
Position: -142
Score: 4.26493
Sequence: CGCTTATTTTTTAATCA
Locus tag: TM1040_0388
Name: ureD
Funciton: Urease accessory protein, UreD
Locus tag: TM1040_0387
Name: ureA
Funciton: Urease, gamma subunit (EC 3.5.1.5)
Locus tag: TM1040_0386
Name: ureB
Funciton: Urease, beta subunit (EC 3.5.1.5)
Locus tag: TM1040_0385
Name: ureC
Funciton: Urease, alpha subunit (EC 3.5.1.5)
Locus tag: TM1040_0384
Name: Jann_1753
Funciton: Conserved hypothetical protein
Locus tag: TM1040_0383
Name: TM1040_0383
Funciton: Conserved hypothetical protein
Locus tag: TM1040_0382
Name: ureE
Funciton: Urease accessory protein, UreE
Locus tag: TM1040_0381
Name: ureF
Funciton: Urease accessory protein, UreF
Locus tag: TM1040_0380
Name: ureG
Funciton: Urease accessory protein, UreG
ureD-ureA-ureB-ureC-Jann_1753-TM1040_0383-ureE-ureF-ureG -142 4.3 CGCTTATTTTTTAATCA TM1040_0388
Sulfitobacter sp. EE-36
Position: -93
Score: 5.16432
Sequence: TGCTCAAATATTAGGCA
Locus tag: EE36_08503
Name: ureD
Funciton: Urease accessory protein, UreD
Locus tag: EE36_08498
Name: ureA
Funciton: Urease, gamma subunit (EC 3.5.1.5)
Locus tag: EE36_08488
Name: ureB
Funciton: Urease, beta subunit (EC 3.5.1.5)
Locus tag: EE36_08483
Name: ureC
Funciton: Urease, alpha subunit (EC 3.5.1.5)
Locus tag: EE36_08478
Name: ureE
Funciton: Urease accessory protein, UreE
Locus tag: EE36_08473
Name: ureF
Funciton: Urease accessory protein, UreF
Locus tag: EE36_08468
Name: ureG
Funciton: Urease accessory protein, UreG
ureD-ureA-ureB-ureC-ureE-ureF-ureG -93 5.2 TGCTCAAATATTAGGCA EE36_08503
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