Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing RPA3661 gene

Properties
Regulog: NtrC - Rhizobiales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/alpha
Built upon 86 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bradyrhizobium japonicum USDA 110
Position: -111
Score: 4.35681
Sequence: TGCTCAATAAATGAACT
Position: -67
Score: 4.91057
Sequence: TGCACAAATCTTGAGCA
Locus tag: blr1448
Name: urtA
Funciton: Urea ABC transporter, substrate-binding component
Locus tag: blr1449
Name: urtB
Funciton: Urea ABC transporter, permease component 1
Locus tag: blr1450
Name: urtC
Funciton: Urea ABC transporter, permease component 2
Locus tag: blr1451
Name: urtD
Funciton: Urea ABC transporter, ATP-binding component 1
Locus tag: blr1452
Name: urtE
Funciton: Urea ABC transporter, ATP-binding component 2
Locus tag: blr1453
Name: ureD
Funciton: Urease accessory protein, UreD
Locus tag: blr1454
Name: ureA
Funciton: Urease, gamma subunit (EC 3.5.1.5)
Locus tag: blr1455
Name: ureB
Funciton: Urease, beta subunit (EC 3.5.1.5)
Locus tag: blr1456
Name: null
Funciton: Metal dependent phosphohydrolase
Locus tag: blr1457
Name: ureC
Funciton: Urease, alpha subunit (EC 3.5.1.5)
urtA-urtB-urtC-urtD-urtE-ureD-ureA-ureB-blr1456-ureC -111 4.4 TGCTCAATAAATGAACT blr1448
-67 4.9 TGCACAAATCTTGAGCA
Bradyrhizobium sp. BTAi1
Position: -248
Score: 4.35645
Sequence: TGCTTTAAAATTAGTCA
Position: -219
Score: 3.86542
Sequence: TGCACAAATTTGGCGCT
Position: -175
Score: 4.68599
Sequence: TGCTCAAAAAATGGGCT
Locus tag: BBta_7018
Name: urtA
Funciton: Urea ABC transporter, substrate-binding component
Locus tag: BBta_7017
Name: urtB
Funciton: Urea ABC transporter, permease component 1
Locus tag: BBta_7016
Name: urtC
Funciton: Urea ABC transporter, permease component 2
Locus tag: BBta_7015
Name: urtD
Funciton: Urea ABC transporter, ATP-binding component 1
Locus tag: BBta_7014
Name: urtE
Funciton: Urea ABC transporter, ATP-binding component 2
Locus tag: BBta_7013
Name: ureD
Funciton: Urease accessory protein, UreD
Locus tag: BBta_7012
Name: ureA
Funciton: Urease, gamma subunit (EC 3.5.1.5)
Locus tag: BBta_7011
Name: ureB
Funciton: Urease, beta subunit (EC 3.5.1.5)
Locus tag: BBta_7010
Name: null
Funciton: Metal dependent phosphohydrolase
Locus tag: BBta_7009
Name: ureC
Funciton: Urease, alpha subunit (EC 3.5.1.5)
urtA-urtB-urtC-urtD-urtE-ureD-ureA-ureB-BBta_7010-ureC -248 4.4 TGCTTTAAAATTAGTCA BBta_7018
-219 3.9 TGCACAAATTTGGCGCT
-175 4.7 TGCTCAAAAAATGGGCT
Rhodopseudomonas palustris CGA009
Position: -246
Score: 4.02468
Sequence: AGTGCAATAATTAATCA
Position: -216
Score: 4.26189
Sequence: TGATCAATTGTTGTGCT
Locus tag: RPA3669
Name: urtA
Funciton: Urea ABC transporter, substrate-binding component
Locus tag: RPA3668
Name: urtB
Funciton: Urea ABC transporter, permease component 1
Locus tag: RPA3667
Name: urtC
Funciton: Urea ABC transporter, permease component 2
Locus tag: RPA3666
Name: urtD
Funciton: Urea ABC transporter, ATP-binding component 1
Locus tag: RPA3665
Name: urtE
Funciton: Urea ABC transporter, ATP-binding component 2
Locus tag: RPA3664
Name: ureD
Funciton: Urease accessory protein, UreD
Locus tag: RPA3663
Name: ureA
Funciton: Urease, gamma subunit (EC 3.5.1.5)
Locus tag: RPA3662
Name: ureB
Funciton: Urease, beta subunit (EC 3.5.1.5)
Locus tag: RPA3661
Name: null
Funciton: Metal dependent phosphohydrolase
Locus tag: RPA3660
Name: ureC
Funciton: Urease, alpha subunit (EC 3.5.1.5)
urtA-urtB-urtC-urtD-urtE-ureD-ureA-ureB-RPA3661-ureC -246 4 AGTGCAATAATTAATCA RPA3669
-216 4.3 TGATCAATTGTTGTGCT