Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing amtB gene

Properties
Regulog: NtrC - Rhizobiales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/alpha
Built upon 86 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Azorhizobium caulinodans ORS 571
Position: -241
Score: 3.95623
Sequence: CGCCTATTTTTAAGGCA
Locus tag: AZC_4227
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: AZC_4226
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -241 4 CGCCTATTTTTAAGGCA AZC_4227
Brucella melitensis 16M
Position: -195
Score: 5.01333
Sequence: AGCTTAAATTTTAAGCA
Locus tag: BMEI0167
Name: amtB
Funciton: Ammonium transporter
amtB -195 5 AGCTTAAATTTTAAGCA BMEI0167
Mesorhizobium loti MAFF303099
Position: -202
Score: 5.20856
Sequence: TGCATAATTTTTGAGCA
Locus tag: mll4247
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: mll4246
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -202 5.2 TGCATAATTTTTGAGCA mll4247
Mesorhizobium sp. BNC1
Position: -203
Score: 4.67744
Sequence: TGCACATTTTTTGTTCA
Locus tag: Meso_3237
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: Meso_3236
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -203 4.7 TGCACATTTTTTGTTCA Meso_3237
Rhizobium etli CFN 42
Position: -200
Score: 4.41525
Sequence: TGCGCATTATTTGTGCG
Locus tag: RHE_CH03974
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: RHE_CH03973
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -200 4.4 TGCGCATTATTTGTGCG RHE_CH03974
Rhizobium leguminosarum bv. viciae 3841
Position: -201
Score: 3.80883
Sequence: TGCGCGTTATTTGTGCG
Locus tag: RL4565
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: RL4564
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -201 3.8 TGCGCGTTATTTGTGCG RL4565
Rhizobium sp. NGR234
Position: -218
Score: 3.86047
Sequence: TGCCTGTTTTTTAATCT
Locus tag: NGR_c31500
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: NGR_c31490
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -218 3.9 TGCCTGTTTTTTAATCT NGR_c31500
Sinorhizobium meliloti 1021
Position: -214
Score: 4.86889
Sequence: TGCTTATATTTTAATCA
Locus tag: SMc03806
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: SMc03807
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -214 4.9 TGCTTATATTTTAATCA SMc03806
Xanthobacter autotrophicus Py2
Position: -244
Score: 4.71057
Sequence: AGATCAATAATTAGGCA
Locus tag: Xaut_2209
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: Xaut_2208
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -244 4.7 AGATCAATAATTAGGCA Xaut_2209
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