Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nrtC gene

Properties
Regulog: NtrC - Rhizobiales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/alpha
Built upon 86 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Agrobacterium tumefaciens str. C58 (Cereon)
Position: -300
Score: 4.62869
Sequence: TGATTAAAATTTAATCG
Locus tag: Atu3905
Name: nrtA
Funciton: Nitrate ABC transporter, substrate-binding component
Locus tag: Atu3904
Name: nrtB
Funciton: Nitrate ABC transporter, permease component
Locus tag: Atu3903
Name: nrtC
Funciton: Nitrate ABC transporter, ATP-binding component
Locus tag: Atu3902
Name: nasD
Funciton: Nitrite reductase, large subunit (EC 1.7.1.4)
Locus tag: Atu3901
Name: nasE
Funciton: Nitrite reductase, small subunit (EC 1.7.1.4)
nrtA-nrtB-nrtC-nasD-nasE -300 4.6 TGATTAAAATTTAATCG Atu3905
Azorhizobium caulinodans ORS 571
Position: -242
Score: 4.62204
Sequence: TGCTCATTTTTTGATCT
Locus tag: AZC_0686
Name: nrtA
Funciton: Nitrate ABC transporter, substrate-binding component
Locus tag: AZC_0685
Name: nrtB
Funciton: Nitrate ABC transporter, permease component
Locus tag: AZC_0684
Name: nrtC
Funciton: Nitrate ABC transporter, ATP-binding component
Locus tag: AZC_0683
Name: hmp
Funciton: Nitric oxide dioxygenase
Locus tag: AZC_0682
Name: nasB
Funciton: Assimilatory nitrate reductase, small subunit (EC:1.7.99.4)
Locus tag: AZC_0681
Name: nirA
Funciton: Ferredoxin--nitrite reductase (EC 1.7.7.1)
Locus tag: AZC_0680
Name: nasB2
Funciton: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
Locus tag: AZC_0679
Name: nasA
Funciton: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
nrtA-nrtB-nrtC-hmp-nasB-nirA-nasB2-nasA -242 4.6 TGCTCATTTTTTGATCT AZC_0686
Bradyrhizobium sp. BTAi1
Position: -314
Score: 4.41525
Sequence: CGCCCACTTTTTGTGCA
Locus tag: BBta_2817
Name: nrtA
Funciton: Nitrate ABC transporter, substrate-binding component
Locus tag: BBta_2819
Name: nrtB
Funciton: Nitrate ABC transporter, permease component
Locus tag: BBta_2820
Name: nrtC
Funciton: Nitrate ABC transporter, ATP-binding component
Locus tag: BBta_2821
Name: hmp
Funciton: Nitric oxide dioxygenase
Locus tag: BBta_2822
Name: nasB
Funciton: Assimilatory nitrate reductase, small subunit (EC:1.7.99.4)
Locus tag: BBta_2823
Name: nasA
Funciton: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
nrtA-nrtB-nrtC-hmp-nasB-nasA -314 4.4 CGCCCACTTTTTGTGCA BBta_2817
Rhizobium etli CFN 42
Position: -289
Score: 4.05001
Sequence: CGCACAAATGATAATCA
Position: -261
Score: 4.58483
Sequence: TGCATATTAAATAATCA
Locus tag: RHE_PF00452
Name: nrtA
Funciton: Nitrate ABC transporter, substrate-binding component
Locus tag: RHE_PF00453
Name: nrtB
Funciton: Nitrate ABC transporter, permease component
Locus tag: RHE_PF00454
Name: nrtC
Funciton: Nitrate ABC transporter, ATP-binding component
nrtA-nrtB-nrtC -289 4.1 CGCACAAATGATAATCA RHE_PF00452
-261 4.6 TGCATATTAAATAATCA
Rhizobium leguminosarum bv. viciae 3841
Position: -227
Score: 4.24955
Sequence: AGCCTAAGAAATAGGCA
Locus tag: pRL100344
Name: nrtA
Funciton: Nitrate ABC transporter, substrate-binding component
Locus tag: pRL100345
Name: nrtB
Funciton: Nitrate ABC transporter, permease component
Locus tag: pRL100346
Name: nrtC
Funciton: Nitrate ABC transporter, ATP-binding component
nrtA-nrtB-nrtC -227 4.2 AGCCTAAGAAATAGGCA pRL100344
Rhizobium sp. NGR234
Position: -338
Score: 3.84647
Sequence: CGCTGCTTTTTTAAGCA
Position: -303
Score: 4.32105
Sequence: CGCACAATTATTGACCA
Locus tag: NGR_b11400
Name: nrtC
Funciton: Nitrate ABC transporter, ATP-binding component
Locus tag: NGR_b11390
Name: nasD
Funciton: Nitrite reductase, large subunit (EC 1.7.1.4)
Locus tag: NGR_b11380
Name: nasE
Funciton: Nitrite reductase, small subunit (EC 1.7.1.4)
Locus tag: NGR_b11370
Name: nasA
Funciton: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
Locus tag: NGR_b11360
Name: cysG
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
nrtC-nasD-nasE-nasA-cysG -338 3.8 CGCTGCTTTTTTAAGCA NGR_b11400
-303 4.3 CGCACAATTATTGACCA
Xanthobacter autotrophicus Py2
Position: -312
Score: 3.83542
Sequence: CGCACAATTTGAATGCA
Position: -252
Score: 4.40539
Sequence: CGCCCAAATTTTCATCA
Locus tag: Xaut_2504
Name: nrtA
Funciton: Nitrate ABC transporter, substrate-binding component
Locus tag: Xaut_2503
Name: nrtB
Funciton: Nitrate ABC transporter, permease component
Locus tag: Xaut_2502
Name: nrtC
Funciton: Nitrate ABC transporter, ATP-binding component
Locus tag: Xaut_2501
Name: hmp
Funciton: Nitric oxide dioxygenase
Locus tag: Xaut_2500
Name: nasB
Funciton: Assimilatory nitrate reductase, small subunit (EC:1.7.99.4)
Locus tag: Xaut_2499
Name: nirA
Funciton: Ferredoxin--nitrite reductase (EC 1.7.7.1)
Locus tag: Xaut_2498
Name: nasB2
Funciton: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
Locus tag: Xaut_2497
Name: nasA
Funciton: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
nrtA-nrtB-nrtC-hmp-nasB-nirA-nasB2-nasA -312 3.8 CGCACAATTTGAATGCA Xaut_2504
-252 4.4 CGCCCAAATTTTCATCA
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