Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing amtB gene

Properties
Regulog: NtrC - Comamonadaceae
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/beta
Built upon 52 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Acidovorax sp. JS42
Position: -155
Score: 5.04813
Sequence: TGCACCAGGCTGGTGCG
Locus tag: Ajs_0162
Name: CHP02001
Funciton: Conserved hypothetical protein CHP02001
Locus tag: Ajs_0163
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: Ajs_0164
Name: amtB
Funciton: Ammonium transporter
CHP02001-glnK-amtB -155 5 TGCACCAGGCTGGTGCG Ajs_0162
Comamonas testosteroni KF-1
Position: -288
Score: 4.88187
Sequence: ATCACCTGTTTGGTGCA
Position: -228
Score: 5.5534
Sequence: CGCACCATCTTGGTGCA
Locus tag: CtesDRAFT_4075
Name: CHP02001
Funciton: Conserved hypothetical protein CHP02001
Locus tag: CtesDRAFT_4074
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: CtesDRAFT_4073
Name: amtB
Funciton: Ammonium transporter
CHP02001-glnK-amtB -288 4.9 ATCACCTGTTTGGTGCA CtesDRAFT_4075
-228 5.6 CGCACCATCTTGGTGCA
Delftia acidovorans SPH-1
Position: -208
Score: 5.44106
Sequence: TGCACTATCTTGGTGCA
Position: -136
Score: 4.72602
Sequence: TGCACAAAGCCGGTGCA
Locus tag: Daci_0301
Name: CHP02001
Funciton: Conserved hypothetical protein CHP02001
Locus tag: Daci_0302
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: Daci_0303
Name: amtB
Funciton: Ammonium transporter
CHP02001-glnK-amtB -208 5.4 TGCACTATCTTGGTGCA Daci_0301
-136 4.7 TGCACAAAGCCGGTGCA
Leptothrix cholodnii SP-6
Position: -193
Score: 5.27882
Sequence: TGCACTGAATTGGTGCC
Locus tag: Lcho_3942
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: Lcho_3941
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -193 5.3 TGCACTGAATTGGTGCC Lcho_3942
Polaromonas naphthalenivorans CJ2
Position: -319
Score: 4.68625
Sequence: TGCATCAAAGTTGTGCA
Position: -295
Score: 4.54282
Sequence: TGCATCATGATGGTGCG
Locus tag: Pnap_0120
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: Pnap_0121
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -319 4.7 TGCATCAAAGTTGTGCA Pnap_0120
-295 4.5 TGCATCATGATGGTGCG
Polaromonas sp. JS666
Position: -153
Score: 5.45531
Sequence: TGCGCCAACTTGGTGCA
Locus tag: Bpro_0182
Name: CHP02001
Funciton: Conserved hypothetical protein CHP02001
Locus tag: Bpro_0183
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: Bpro_0184
Name: amtB
Funciton: Ammonium transporter
CHP02001-glnK-amtB -153 5.5 TGCGCCAACTTGGTGCA Bpro_0182
Rhodoferax ferrireducens DSM 15236
Position: -203
Score: 4.95303
Sequence: TGCACCAAGTATGTGCG
Locus tag: Rfer_0472
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: Rfer_0473
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -203 5 TGCACCAAGTATGTGCG Rfer_0472
Variovorax paradoxus S110
Position: -207
Score: 4.86106
Sequence: CTCACCATTGTGGTGCG
Locus tag: Vapar_0217
Name: CHP02001
Funciton: Conserved hypothetical protein CHP02001
Locus tag: Vapar_0218
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: Vapar_0219
Name: amtB
Funciton: Ammonium transporter
CHP02001-glnK-amtB -207 4.9 CTCACCATTGTGGTGCG Vapar_0217
Verminephrobacter eiseniae EF01-2
Position: -202
Score: 4.36901
Sequence: CTCCCCGAATGGGTGCG
Locus tag: Veis_3315
Name: CHP02001
Funciton: Conserved hypothetical protein CHP02001
Locus tag: Veis_3314
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: Veis_3313
Name: amtB
Funciton: Ammonium transporter
CHP02001-glnK-amtB -202 4.4 CTCCCCGAATGGGTGCG Veis_3315
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