Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ntrC gene

Properties
Regulog: NtrC - Comamonadaceae
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/beta
Built upon 52 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Acidovorax avenae subsp. citrulli AAC00-1
Position: -207
Score: 5.56221
Sequence: TGCACGATTTTGGTGCG
Position: -184
Score: 4.85358
Sequence: GGCCCCGAATTGGTGCG
Locus tag: Aave_1442
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
Locus tag: Aave_1443
Name: ntrZ
Funciton: Conserved hypothetical signal peptide protein
Locus tag: Aave_1444
Name: ntrB
Funciton: putative nitrogen regulation protein NR(II)
Locus tag: Aave_1445
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
glnA-ntrZ-ntrB-ntrC -207 5.6 TGCACGATTTTGGTGCG Aave_1442
-184 4.9 GGCCCCGAATTGGTGCG
Acidovorax sp. JS42
Position: -206
Score: 5.67622
Sequence: TGCACCAAACGGGTGCA
Position: -134
Score: 5.12206
Sequence: TGCACGCGTTTGGTGCG
Locus tag: Ajs_1189
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
Locus tag: Ajs_1190
Name: ntrZ
Funciton: Conserved hypothetical signal peptide protein
Locus tag: Ajs_1191
Name: ntrB
Funciton: putative nitrogen regulation protein NR(II)
Locus tag: Ajs_1192
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
glnA-ntrZ-ntrB-ntrC -206 5.7 TGCACCAAACGGGTGCA Ajs_1189
-134 5.1 TGCACGCGTTTGGTGCG
Delftia acidovorans SPH-1
Position: -286
Score: 5.7909
Sequence: TGCACTCATTTGGTGCA
Position: -214
Score: 5.55922
Sequence: TGCACCGATTTGGTGAA
Position: -84
Score: 4.73075
Sequence: TGCACTCAATGGATGCA
Locus tag: Daci_5002
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
Locus tag: Daci_5001
Name: ntrZ
Funciton: Conserved hypothetical signal peptide protein
Locus tag: Daci_5000
Name: ntrB
Funciton: putative nitrogen regulation protein NR(II)
Locus tag: Daci_4999
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
glnA-ntrZ-ntrB-ntrC -286 5.8 TGCACTCATTTGGTGCA Daci_5002
-214 5.6 TGCACCGATTTGGTGAA
-84 4.7 TGCACTCAATGGATGCA
Leptothrix cholodnii SP-6
Position: -225
Score: 4.57766
Sequence: GGCCCCGAAATGGTGCG
Position: -178
Score: 5.06771
Sequence: CGCACCATGTTTGTGCA
Locus tag: Lcho_3581
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
Locus tag: Lcho_3582
Name: ntrZ
Funciton: Conserved hypothetical signal peptide protein
Locus tag: Lcho_3583
Name: ntrB
Funciton: putative nitrogen regulation protein NR(II)
Locus tag: Lcho_3584
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
glnA-ntrZ-ntrB-ntrC -225 4.6 GGCCCCGAAATGGTGCG Lcho_3581
-178 5.1 CGCACCATGTTTGTGCA
Methylibium petroleiphilum PM1
Position: -244
Score: 4.57766
Sequence: GGCCCCGAAATGGTGCG
Locus tag: Mpe_A2076
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
Locus tag: Mpe_A2075
Name: ntrZ
Funciton: Conserved hypothetical signal peptide protein
Locus tag: Mpe_A2074
Name: ntrB
Funciton: putative nitrogen regulation protein NR(II)
Locus tag: Mpe_A2073
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
glnA-ntrZ-ntrB-ntrC -244 4.6 GGCCCCGAAATGGTGCG Mpe_A2076
Polaromonas naphthalenivorans CJ2
Position: -250
Score: 4.57766
Sequence: GGCCCTGAATTGGTGCG
Position: -200
Score: 4.99954
Sequence: CGCACTTTTTTGGTGCT
Locus tag: Pnap_2780
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
Locus tag: Pnap_2779
Name: ntrZ
Funciton: Conserved hypothetical signal peptide protein
Locus tag: Pnap_2778
Name: ntrB
Funciton: putative nitrogen regulation protein NR(II)
Locus tag: Pnap_2777
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
glnA-ntrZ-ntrB-ntrC -250 4.6 GGCCCTGAATTGGTGCG Pnap_2780
-200 5 CGCACTTTTTTGGTGCT
Polaromonas sp. JS666
Position: -242
Score: 4.85358
Sequence: GGCCCCGAATTGGTGCG
Position: -216
Score: 5.5788
Sequence: TGCGCTAAATTGGTGCA
Locus tag: Bpro_1807
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
Locus tag: Bpro_1808
Name: ntrZ
Funciton: Conserved hypothetical signal peptide protein
Locus tag: Bpro_1809
Name: ntrB
Funciton: putative nitrogen regulation protein NR(II)
Locus tag: Bpro_1810
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
glnA-ntrZ-ntrB-ntrC -242 4.9 GGCCCCGAATTGGTGCG Bpro_1807
-216 5.6 TGCGCTAAATTGGTGCA
Rhodoferax ferrireducens DSM 15236
Position: -236
Score: 4.74124
Sequence: GGCCCTGAATTGGTGCA
Position: -184
Score: 5.27545
Sequence: CGCACTTAATTGGTGCT
Locus tag: Rfer_2979
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
Locus tag: Rfer_2980
Name: ntrZ
Funciton: Conserved hypothetical signal peptide protein
Locus tag: Rfer_2981
Name: ntrB
Funciton: putative nitrogen regulation protein NR(II)
Locus tag: Rfer_2982
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
glnA-ntrZ-ntrB-ntrC -236 4.7 GGCCCTGAATTGGTGCA Rfer_2979
-184 5.3 CGCACTTAATTGGTGCT
Variovorax paradoxus S110
Position: -139
Score: 5.66305
Sequence: TGCACCAATTTGGTGAT
Locus tag: Vapar_1632
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
Locus tag: Vapar_1633
Name: ntrZ
Funciton: Conserved hypothetical signal peptide protein
Locus tag: Vapar_1634
Name: ntrB
Funciton: putative nitrogen regulation protein NR(II)
Locus tag: Vapar_1635
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
glnA-ntrZ-ntrB-ntrC -139 5.7 TGCACCAATTTGGTGAT Vapar_1632
Verminephrobacter eiseniae EF01-2
Position: -219
Score: 5.13864
Sequence: TGCACGCATTTGGCGCA
Position: -196
Score: 4.85358
Sequence: GGCCCCGAATTGGTGCG
Locus tag: Veis_3154
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
Locus tag: Veis_3153
Name: ntrZ
Funciton: Conserved hypothetical signal peptide protein
Locus tag: Veis_3152
Name: ntrB
Funciton: putative nitrogen regulation protein NR(II)
Locus tag: Veis_3151
Name: ntrC
Funciton: Nitrogen regulation protein NR(I), Fis family
glnA-ntrZ-ntrB-ntrC -219 5.1 TGCACGCATTTGGCGCA Veis_3154
-196 4.9 GGCCCCGAATTGGTGCG
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