Orthologous regulated operons containing PF01841 gene
| Regulog: | NtrC - Pseudomonadaceae |
| Regulator type: | Transcription factor |
| Regulator family: | Fis |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrogen assimilation |
| Effector: | Phosphorylated NtrB, signal histidine kinase |
| Phylum: | Proteobacteria/gamma |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Pseudomonas aeruginosa PAO1 | ||||
|
Position: -118
Score: 4.54729 Sequence: TGCACCAGACTGGGGCG
Locus tag: PA1730
Name: ybdK Funciton: Carboxylate-amine ligase
Locus tag: PA1731
Name: PF04168 Funciton: Conserved hypothetical protein
Locus tag: PA1732
Name: PF01841 Funciton: Transglutaminase-like protein |
||||
| ybdK-PF04168-PF01841 | -118 | 4.5 | TGCACCAGACTGGGGCG | PA1730 |
| Pseudomonas fluorescens Pf-5 | ||||
|
Position: -283
Score: 4.4866 Sequence: TGCACCGATTCTGTTCG
Locus tag: PFL_2518
Name: ybdK Funciton: Carboxylate-amine ligase
Locus tag: PFL_2519
Name: PF04168 Funciton: Conserved hypothetical protein
Locus tag: PFL_2520
Name: PF01841 Funciton: Transglutaminase-like protein |
||||
| ybdK-PF04168-PF01841 | -283 | 4.5 | TGCACCGATTCTGTTCG | PFL_2518 |
| Pseudomonas mendocina ymp | ||||
|
Position: -120
Score: 5.17173 Sequence: CGCACCGAGATGGTGCG
Locus tag: Pmen_2597
Name: ybdK Funciton: Carboxylate-amine ligase
Locus tag: Pmen_2596
Name: PF04168 Funciton: Conserved hypothetical protein
Locus tag: Pmen_2595
Name: PF01841 Funciton: Transglutaminase-like protein |
||||
| ybdK-PF04168-PF01841 | -120 | 5.2 | CGCACCGAGATGGTGCG | Pmen_2597 |
| Pseudomonas putida KT2440 | ||||
|
Position: -295
Score: 4.47851 Sequence: CGCCCCATTTCGGTTCA
Position: -256
Score: 4.06746 Sequence: CGCCCTTTTTTGATGCG
Locus tag: PP2688
Name: ybdK Funciton: Carboxylate-amine ligase
Locus tag: PP2687
Name: PF04168 Funciton: Conserved hypothetical protein
Locus tag: PP2686
Name: PF01841 Funciton: Transglutaminase-like protein |
||||
| ybdK-PF04168-PF01841 | -295 | 4.5 | CGCCCCATTTCGGTTCA | PP2688 |
| -256 | 4.1 | CGCCCTTTTTTGATGCG | ||
| Pseudomonas syringae pv. tomato str. DC3000 | ||||
|
Position: -119
Score: 4.96325 Sequence: TGCACAGGAATGGTGCG
Locus tag: PSPTO2059
Name: ybdK Funciton: Carboxylate-amine ligase
Locus tag: PSPTO2060
Name: PF04168 Funciton: Conserved hypothetical protein
Locus tag: PSPTO2061
Name: PF01841 Funciton: Transglutaminase-like protein |
||||
| ybdK-PF04168-PF01841 | -119 | 5 | TGCACAGGAATGGTGCG | PSPTO2059 |