Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing glnA gene

Properties
Regulog: NtrC - Pseudomonadaceae
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/gamma
Built upon 49 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Azotobacter vinelandii AvOP
Position: -232
Score: 4.13814
Sequence: CGCACCAAAATGAAACA
Position: -100
Score: 4.07032
Sequence: TGCTCCCTTGTGGCGCG
Locus tag: Avin_45850
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnA -232 4.1 CGCACCAAAATGAAACA Avin_45850
-100 4.1 TGCTCCCTTGTGGCGCG
Pseudomonas aeruginosa PAO1
Position: -220
Score: 5.08295
Sequence: TGCACCAACATGGAGCA
Position: -207
Score: 5.32182
Sequence: AGCACCATAACGGTGCA
Locus tag: PA5119
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnA -220 5.1 TGCACCAACATGGAGCA PA5119
-207 5.3 AGCACCATAACGGTGCA
Pseudomonas entomophila L48
Position: -236
Score: 5.83128
Sequence: CGCACCAATATGGTGCA
Locus tag: PSEEN0390
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnA -236 5.8 CGCACCAATATGGTGCA PSEEN0390
Pseudomonas fluorescens Pf-5
Position: -235
Score: 4.48614
Sequence: TGCACCAAAACGGGTCA
Locus tag: PFL_0386
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnA -235 4.5 TGCACCAAAACGGGTCA PFL_0386
Pseudomonas mendocina ymp
Position: -233
Score: 4.06809
Sequence: CGCACCAAAATAGGTCT
Position: -202
Score: 4.42081
Sequence: AGCCCTTAAATGGTGCA
Locus tag: Pmen_4140
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnA -233 4.1 CGCACCAAAATAGGTCT Pmen_4140
-202 4.4 AGCCCTTAAATGGTGCA
Pseudomonas putida KT2440
Position: -236
Score: 5.28868
Sequence: CGCACCCTATTGGTGCG
Position: -205
Score: 4.44112
Sequence: CGCATCGTAAGGGTGCA
Locus tag: PP5046
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnA -236 5.3 CGCACCCTATTGGTGCG PP5046
-205 4.4 CGCATCGTAAGGGTGCA
Pseudomonas stutzeri A1501
Position: -243
Score: 4.55771
Sequence: CGCACCAAAACAATGCG
Position: -212
Score: 4.85481
Sequence: CGCACCATTAACGCGCA
Locus tag: PST_0353
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnA -243 4.6 CGCACCAAAACAATGCG PST_0353
-212 4.9 CGCACCATTAACGCGCA
Pseudomonas syringae pv. tomato str. DC3000
Position: -208
Score: 4.91774
Sequence: AGCGCCATAACGGTGCG
Locus tag: PSPTO0359
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnA -208 4.9 AGCGCCATAACGGTGCG PSPTO0359
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