Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing glnK gene

Properties
Regulog: NtrC - Pseudomonadaceae
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/gamma
Built upon 49 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Azotobacter vinelandii AvOP
Position: -296
Score: 4.90766
Sequence: CGCACGGTTTTCGTGCG
Locus tag: Avin_47790
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: Avin_47780
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -296 4.9 CGCACGGTTTTCGTGCG Avin_47790
Pseudomonas aeruginosa PAO1
Position: -338
Score: 5.16879
Sequence: TGCGCCTATTTGGTGCG
Locus tag: PA5288
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: PA5287
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -338 5.2 TGCGCCTATTTGGTGCG PA5288
Pseudomonas entomophila L48
Position: -310
Score: 5.34149
Sequence: CGCACCGATTTTGTGCG
Locus tag: PSEEN5376
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: PSEEN5375
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -310 5.3 CGCACCGATTTTGTGCG PSEEN5376
Pseudomonas fluorescens Pf-5
Position: -347
Score: 4.52647
Sequence: TGCACGTTTTTCGCGCA
Position: -314
Score: 5.34882
Sequence: CGCACCGTTTTTGTGCG
Locus tag: PFL_6020
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: PFL_6019
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -347 4.5 TGCACGTTTTTCGCGCA PFL_6020
-314 5.3 CGCACCGTTTTTGTGCG
Pseudomonas mendocina ymp
Position: -341
Score: 5.04392
Sequence: TGCACAATTTTTGAGCA
Position: -308
Score: 5.6002
Sequence: CGCACCAAATTTGTGCG
Locus tag: Pmen_0259
Name: glnK
Funciton: Nitrogen regulatory protein P-II
glnK -341 5 TGCACAATTTTTGAGCA Pmen_0259
-308 5.6 CGCACCAAATTTGTGCG
Pseudomonas putida KT2440
Position: -299
Score: 4.63899
Sequence: TGCACATTTTTCGCGCA
Position: -266
Score: 5.35645
Sequence: CGCACCGAAATTGTGCA
Locus tag: PP5234
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: PP5233
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -299 4.6 TGCACATTTTTCGCGCA PP5234
-266 5.4 CGCACCGAAATTGTGCA
Pseudomonas stutzeri A1501
Position: -329
Score: 4.78521
Sequence: TGCACAAAAAATGAGCA
Position: -296
Score: 5.49501
Sequence: CGCACCATTTTCGTGCG
Locus tag: PST_0502
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: PST_0503
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -329 4.8 TGCACAAAAAATGAGCA PST_0502
-296 5.5 CGCACCATTTTCGTGCG
Pseudomonas syringae pv. tomato str. DC3000
Position: -348
Score: 4.57855
Sequence: TGCACGCTTATGGCGCG
Position: -315
Score: 4.89031
Sequence: AGCACCATTGTTGTGCA
Locus tag: PSPTO0217
Name: glnK
Funciton: Nitrogen regulatory protein P-II
Locus tag: PSPTO0218
Name: amtB
Funciton: Ammonium transporter
glnK-amtB -348 4.6 TGCACGCTTATGGCGCG PSPTO0217
-315 4.9 AGCACCATTGTTGTGCA
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