Orthologous regulated operons containing Rmet_0107 gene
Regulog: | LiuR - Ralstonia |
Regulator type: | Transcription factor |
Regulator family: | MerR |
Regulation mode: | |
Biological process: | Branched-chain amino acid degradation |
Effector: | |
Phylum: | Proteobacteria/beta |
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Operon | Position | Score | Sequence | Locus Tag of the First Gene |
---|---|---|---|---|
Cupriavidus taiwanensis | ||||
Position: -90
Score: 6.63969 Sequence: ATTGACGTTTACGTAAAC
Position: -84
Score: 5.53588 Sequence: GTTTACGTAAACGTAAAT
Locus tag: RALTA_A0109
Name: paaI Funciton: Phenylacetic acid degradation-related protein
Locus tag: RALTA_A0110
Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: RALTA_A0111
Name: aceK Funciton: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
Locus tag: RALTA_A0112
Name: cah Funciton: Carbonic anhydrase (EC 4.2.1.1)
Locus tag: RALTA_A0113
Name: ivdA Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
Locus tag: RALTA_A0114
Name: null Funciton: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Locus tag: RALTA_A0115
Name: ivdC Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: RALTA_A0116
Name: null Funciton: 2-Hydroxychromene-2-carboxylate isomerase
Locus tag: RALTA_A0117
Name: null Funciton: Putative phosphatase YieH
Locus tag: RALTA_A0118
Name: null Funciton: hypothetical protein
Locus tag: RALTA_A0119
Name: null Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) / Glutathione S-transferase
Locus tag: RALTA_A0120
Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: RALTA_A0121
Name: null Funciton: Dienelactone hydrolase or related enzyme
Locus tag: RALTA_A0122
Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) |
||||
paaI-liuA-aceK-cah-ivdA-RALTA_A0114-ivdC-RALTA_A0116-RALTA_A0117-RALTA_A0118-RALTA_A0119-liuB-RALTA_A0121-liuC | -90 | 6.6 | ATTGACGTTTACGTAAAC | RALTA_A0109 |
-84 | 5.5 | GTTTACGTAAACGTAAAT | ||
Ralstonia eutropha H16 | ||||
Position: -93
Score: 6.63969 Sequence: ATTGACGTTTACGTAAAC
Position: -87
Score: 5.34588 Sequence: GTTTACGTAAACGTCAAT
Locus tag: H16_A0166
Name: paaI Funciton: Phenylacetic acid degradation-related protein
Locus tag: H16_A0167
Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: H16_A0168
Name: aceK Funciton: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
Locus tag: H16_A0169
Name: cah Funciton: Carbonic anhydrase (EC 4.2.1.1)
Locus tag: H16_A0170
Name: ivdA Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
Locus tag: H16_A0171
Name: h16_A0171 Funciton: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Locus tag: H16_A0172
Name: ivdC Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: H16_A0173
Name: h16_A0173 Funciton: 2-Hydroxychromene-2-carboxylate isomerase
Locus tag: H16_A0174
Name: h16_A0174 Funciton: Putative phosphatase YieH
Locus tag: H16_A0175
Name: h16_A0175 Funciton: hypothetical protein
Locus tag: H16_A0176
Name: h16_A0176 Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) / Glutathione S-transferase
Locus tag: H16_A0177
Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: H16_A0178
Name: h16_A0178 Funciton: Dienelactone hydrolase or related enzyme
Locus tag: H16_A0179
Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) |
||||
paaI-liuA-aceK-cah-ivdA-h16_A0171-ivdC-h16_A0173-h16_A0174-h16_A0175-h16_A0176-liuB-h16_A0178-liuC | -93 | 6.6 | ATTGACGTTTACGTAAAC | H16_A0166 |
-87 | 5.3 | GTTTACGTAAACGTCAAT | ||
Ralstonia eutropha JMP134 | ||||
Position: -58
Score: 6.63969 Sequence: ATTGACGTTTACGTAAAC
Position: -52
Score: 5.34588 Sequence: GTTTACGTAAACGTCAAT
Locus tag: Reut_A0134
Name: paaI Funciton: Phenylacetic acid degradation-related protein
Locus tag: Reut_A0135
Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: Reut_A0136
Name: aceK Funciton: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
Locus tag: Reut_A0137
Name: cah Funciton: Carbonic anhydrase (EC 4.2.1.1)
Locus tag: Reut_A0138
Name: ivdA Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
Locus tag: Reut_A0139
Name: null Funciton: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Locus tag: Reut_A0140
Name: ivdC Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: Reut_A0141
Name: null Funciton: 2-Hydroxychromene-2-carboxylate isomerase
Locus tag: Reut_A0142
Name: null Funciton: Putative phosphatase YieH
Locus tag: Reut_A0143
Name: null Funciton: hypothetical protein
Locus tag: Reut_A0144
Name: null Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2) / Glutathione S-transferase
Locus tag: Reut_A0145
Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
Locus tag: Reut_A0146
Name: null Funciton: Dienelactone hydrolase or related enzyme |
||||
paaI-liuA-aceK-cah-ivdA-Reut_A0139-ivdC-Reut_A0141-Reut_A0142-Reut_A0143-Reut_A0144-liuB-Reut_A0146 | -58 | 6.6 | ATTGACGTTTACGTAAAC | Reut_A0134 |
-52 | 5.3 | GTTTACGTAAACGTCAAT | ||
Ralstonia metallidurans CH34 | ||||
Position: -87
Score: 6.63969 Sequence: ATTGACGTTTACGTAAAC
Position: -81
Score: 5.34588 Sequence: GTTTACGTAAACGTCAAT
Locus tag: Rmet_0103
Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: Rmet_0104
Name: aceK Funciton: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
Locus tag: Rmet_0105
Name: cah Funciton: Carbonic anhydrase (EC 4.2.1.1)
Locus tag: Rmet_0106
Name: ivdA Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
Locus tag: Rmet_0107
Name: null Funciton: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Locus tag: Rmet_0108
Name: ivdC Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: Rmet_0109
Name: null Funciton: 2-Hydroxychromene-2-carboxylate isomerase
Locus tag: Rmet_0110
Name: null Funciton: Putative phosphatase YieH
Locus tag: Rmet_0111
Name: null Funciton: hypothetical protein
Locus tag: Rmet_0112
Name: null Funciton: Dienelactone hydrolase or related enzyme
Locus tag: Rmet_0113
Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) |
||||
liuA-aceK-cah-ivdA-Rmet_0107-ivdC-Rmet_0109-Rmet_0110-Rmet_0111-Rmet_0112-liuC | -87 | 6.6 | ATTGACGTTTACGTAAAC | Rmet_0103 |
-81 | 5.3 | GTTTACGTAAACGTCAAT |