Orthologous regulated operons containing rhaM gene

Properties
Regulog:	RhaR - Rhodobacterales
Regulator type:	Transcription factor
Regulator family:	DeoR
Regulation mode:	repressor
Biological process:	Rhamnose utilization
Effector:	Rhamnose
Phylum:	Proteobacteria

Built upon 11 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Oceanicola granulosus HTCC2516
Position: -137 Score: 4.94763 Sequence: TCGAGCG-(3)-TCGCTCA Position: -116 Score: 5.52735 Sequence: TCAATCA-(3)-TCGCTCA Position: -74 Score: 6.65774 Sequence: ATGATTG-(3)-ATGATCG Position: -64 Score: 6.65774 Sequence: ATGATCG-(3)-ATGATTG Locus tag: OG2516_12156 Name: rhaR Funciton: Predicted transcriptional regulator for rhamnose utilization, DeoR familyprotein Locus tag: OG2516_12161 Name: rhaF Funciton: L-rhamnose ABC transporter, periplasmic rhamnose-binding protein Locus tag: OG2516_12166 Name: rhaG Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component Locus tag: OG2516_12171 Name: rhaH Funciton: L-rhamnose ABC transporter, permease component 1 Locus tag: OG2516_12176 Name: rhaJ Funciton: L-rhamnose ABC transporter, permease component 2 Locus tag: OG2516_12181 Name: rhaM Funciton: L-rhamnose mutarotase Locus tag: OG2516_12186 Name: rhaK Funciton: putative rhamnulokinase
rhaR-rhaF-rhaG-rhaH-rhaJ-rhaM-rhaK	-137	4.9	TCGAGCG-(3)-TCGCTCA	OG2516_12156
	-116	5.5	TCAATCA-(3)-TCGCTCA
	-74	6.7	ATGATTG-(3)-ATGATCG
	-64	6.7	ATGATCG-(3)-ATGATTG
Rhodobacterales bacterium HTCC2654
Position: -114 Score: 4.83012 Sequence: TCAACCA-(3)-CCGATCA Position: -104 Score: 6.10345 Sequence: CCGATCA-(3)-ACGATCA Position: -63 Score: 5.37772 Sequence: ATGAAAA-(3)-TTGATTG Locus tag: RB2654_09464 Name: rhaR Funciton: Predicted transcriptional regulator for rhamnose utilization, DeoR familyprotein Locus tag: RB2654_09459 Name: rhaF Funciton: L-rhamnose ABC transporter, periplasmic rhamnose-binding protein Locus tag: RB2654_09454 Name: rhaG Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component Locus tag: RB2654_09449 Name: rhaH Funciton: L-rhamnose ABC transporter, permease component 1 Locus tag: RB2654_09444 Name: rhaJ Funciton: L-rhamnose ABC transporter, permease component 2 Locus tag: RB2654_09439 Name: rhaM Funciton: L-rhamnose mutarotase Locus tag: RB2654_09434 Name: rhaK Funciton: putative rhamnulokinase
rhaR-rhaF-rhaG-rhaH-rhaJ-rhaM-rhaK	-114	4.8	TCAACCA-(3)-CCGATCA	RB2654_09464
	-104	6.1	CCGATCA-(3)-ACGATCA
	-63	5.4	ATGAAAA-(3)-TTGATTG