Profile of regulator RhaR in Rhodobacterales
| Regulator family: | DeoR |
| Regulation mode: | repressor |
| Biological process: | Rhamnose utilization |
| Effector: | Rhamnose |
| Regulog: | RhaR - Rhodobacterales |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By TF family - DeoR
- By effector - Rhamnose
- By pathway - Rhamnose utilization
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Oceanicola granulosus HTCC2516 | |||||
| OG2516_12156 | rhaR | -74 | 6.7 | ATGATTG-(3)-ATGATCG | |
| OG2516_12156 | rhaR | -64 | 6.7 | ATGATCG-(3)-ATGATTG | |
| OG2516_12156 | rhaR | -137 | 4.9 | TCGAGCG-(3)-TCGCTCA | |
| OG2516_12156 | rhaR | -116 | 5.5 | TCAATCA-(3)-TCGCTCA | |
| OG2516_12151 | rhaEW | -140 | 6.4 | TCGATCA-(3)-TCAATCA | |
| OG2516_12151 | rhaEW | -150 | 6.4 | TCAATCA-(3)-TCGATCA | |
| Rhodobacterales bacterium HTCC2654 | |||||
| RB2654_09464 | rhaR | -114 | 4.8 | TCAACCA-(3)-CCGATCA | |
| RB2654_09464 | rhaR | -63 | 5.4 | ATGAAAA-(3)-TTGATTG | |
| RB2654_09469 | rhaEW | -60 | 6.9 | ATGATCG-(3)-ATGATCG | |
| RB2654_09464 | rhaR | -104 | 6.1 | CCGATCA-(3)-ACGATCA | |
| RB2654_09469 | rhaEW | -50 | 5.7 | ATGATCG-(3)-TTGGTTG | |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |