Orthologous regulated operons containing rhaI gene

Properties
Regulog:	RhaR - Rhizobiales
Regulator type:	Transcription factor
Regulator family:	DeoR
Regulation mode:	repressor
Biological process:	Rhamnose utilization
Effector:	Rhamnose
Phylum:	Proteobacteria

Built upon 39 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Agrobacterium tumefaciens str. C58 (Cereon)
Position: -158 Score: 6.3558 Sequence: TCAATCA-(3)-ACGATCA Position: -117 Score: 5.637 Sequence: ATGAAAA-(3)-ATGATCG Position: -107 Score: 6.65774 Sequence: ATGATCG-(3)-TTGATTG Locus tag: Atu3485 Name: rhaEW Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Lactaldehyde dehydrogenase (EC 1.2.1.22) Locus tag: Atu3484 Name: rhaI Funciton: L-rhamnose isomerase (EC 5.3.1.14)
rhaEW-rhaI	-158	6.4	TCAATCA-(3)-ACGATCA	Atu3485
	-117	5.6	ATGAAAA-(3)-ATGATCG
	-107	6.7	ATGATCG-(3)-TTGATTG
Mesorhizobium loti MAFF303099
Position: -150 Score: 5.39465 Sequence: ACGAGCA-(3)-TCAATCA Position: -140 Score: 5.79128 Sequence: TCAATCA-(3)-CCGATCA Position: -99 Score: 6.91702 Sequence: ATGATCG-(3)-TTGATCG Position: -89 Score: 6.65774 Sequence: TTGATCG-(3)-ATGATTG Locus tag: mlr5708 Name: rhaEW Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Lactaldehyde dehydrogenase (EC 1.2.1.22) Locus tag: mlr5709 Name: rhaI Funciton: L-rhamnose isomerase (EC 5.3.1.14)
rhaEW-rhaI	-150	5.4	ACGAGCA-(3)-TCAATCA	mlr5708
	-140	5.8	TCAATCA-(3)-CCGATCA
	-99	6.9	ATGATCG-(3)-TTGATCG
	-89	6.7	TTGATCG-(3)-ATGATTG
Rhizobium etli CFN 42
Position: -152 Score: 6.3558 Sequence: TCAATCA-(3)-ACGATCA Position: -111 Score: 6.60485 Sequence: ATAATCG-(3)-TTGATCG Position: -101 Score: 6.60247 Sequence: TTGATCG-(3)-TCGATTG Locus tag: RHE_PE00291 Name: rhaEW Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Lactaldehyde dehydrogenase (EC 1.2.1.22) Locus tag: RHE_PE00292 Name: rhaI Funciton: L-rhamnose isomerase (EC 5.3.1.14)
rhaEW-rhaI	-152	6.4	TCAATCA-(3)-ACGATCA	RHE_PE00291
	-111	6.6	ATAATCG-(3)-TTGATCG
	-101	6.6	TTGATCG-(3)-TCGATTG
Rhizobium leguminosarum bv. viciae 3841
Position: -153 Score: 6.3558 Sequence: TCAATCA-(3)-ACGATCA Position: -112 Score: 6.60485 Sequence: ATAATCG-(3)-TTGATCG Position: -102 Score: 6.60247 Sequence: TTGATCG-(3)-TCGATTG Locus tag: pRL110415 Name: rhaEW Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Lactaldehyde dehydrogenase (EC 1.2.1.22) Locus tag: pRL110416 Name: rhaI Funciton: L-rhamnose isomerase (EC 5.3.1.14)
rhaEW-rhaI	-153	6.4	TCAATCA-(3)-ACGATCA	pRL110415
	-112	6.6	ATAATCG-(3)-TTGATCG
	-102	6.6	TTGATCG-(3)-TCGATTG
Rhizobium sp. NGR234
Position: -156 Score: 6.3558 Sequence: TCAATCA-(3)-TCGATCA Position: -115 Score: 5.74113 Sequence: ATGAACG-(3)-CTGATCG Position: -105 Score: 6.09321 Sequence: CTGATCG-(3)-TTGATTG Locus tag: NGR_c02430 Name: rhaEW Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Lactaldehyde dehydrogenase (EC 1.2.1.22) Locus tag: NGR_c02420 Name: rhaI Funciton: L-rhamnose isomerase (EC 5.3.1.14)
rhaEW-rhaI	-156	6.4	TCAATCA-(3)-TCGATCA	NGR_c02430
	-115	5.7	ATGAACG-(3)-CTGATCG
	-105	6.1	CTGATCG-(3)-TTGATTG
Sinorhizobium meliloti 1021
Position: -155 Score: 6.04363 Sequence: TCAATCA-(3)-TCAATCA Position: -114 Score: 6.30565 Sequence: ATGAACG-(3)-TTGATCG Position: -104 Score: 6.65774 Sequence: TTGATCG-(3)-TTGATTG Locus tag: SMc02322 Name: rhaEW Funciton: Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / Lactaldehyde dehydrogenase (EC 1.2.1.22) Locus tag: SMc02321 Name: rhaI Funciton: L-rhamnose isomerase (EC 5.3.1.14)
rhaEW-rhaI	-155	6	TCAATCA-(3)-TCAATCA	SMc02322
	-114	6.3	ATGAACG-(3)-TTGATCG
	-104	6.7	TTGATCG-(3)-TTGATTG

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Orthologous regulated operons containing rhaI gene

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --