Orthologous regulated operons containing rhaH gene
| Regulog: | RhaR - Rhizobiales |
| Regulator type: | Transcription factor |
| Regulator family: | DeoR |
| Regulation mode: | repressor |
| Biological process: | Rhamnose utilization |
| Effector: | Rhamnose |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Agrobacterium tumefaciens str. C58 (Cereon) | ||||
|
Position: -111
Score: 6.3558 Sequence: TCAATCA-(3)-ACGATCA
Position: -60
Score: 6.65774 Sequence: TTGATCG-(3)-TTGATTG
Locus tag: Atu3486
Name: rhaR Funciton: Predicted transcriptional regulator for rhamnose utilization, DeoR family
Locus tag: Atu3487
Name: rhaF Funciton: L-rhamnose ABC transporter, periplasmic rhamnose-binding protein
Locus tag: Atu3488
Name: rhaG Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component
Locus tag: Atu3489
Name: rhaH Funciton: L-rhamnose ABC transporter, permease component 1
Locus tag: Atu3490
Name: rhaJ Funciton: L-rhamnose ABC transporter, permease component 2
Locus tag: Atu3491
Name: rhaM Funciton: L-rhamnose mutarotase
Locus tag: Atu3492
Name: rhaK Funciton: putative rhamnulokinase |
||||
| rhaR-rhaF-rhaG-rhaH-rhaJ-rhaM-rhaK | -111 | 6.4 | TCAATCA-(3)-ACGATCA | Atu3486 |
| -60 | 6.7 | TTGATCG-(3)-TTGATTG | ||
| Mesorhizobium loti MAFF303099 | ||||
|
Position: -113
Score: 6.3558 Sequence: TCAATCA-(3)-ACGATCA
Position: -107
Score: 5.15555 Sequence: ATAAACG-(3)-AAGATCG
Position: -103
Score: 6.66797 Sequence: ACGATCA-(3)-TCGATCA
Position: -62
Score: 6.65774 Sequence: ATGATCG-(3)-ATGATTG
Locus tag: mll5707
Name: rhaR Funciton: Predicted transcriptional regulator for rhamnose utilization, DeoR family
Locus tag: mll5706
Name: rhaF Funciton: L-rhamnose ABC transporter, periplasmic rhamnose-binding protein
Locus tag: mll5705
Name: rhaG Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component
Locus tag: mll5704
Name: rhaH Funciton: L-rhamnose ABC transporter, permease component 1
Locus tag: mll5703
Name: rhaJ Funciton: L-rhamnose ABC transporter, permease component 2
Locus tag: mll5702
Name: rhaM Funciton: L-rhamnose mutarotase
Locus tag: mll5701
Name: rhaK Funciton: putative rhamnulokinase |
||||
| rhaR-rhaF-rhaG-rhaH-rhaJ-rhaM-rhaK | -113 | 6.4 | TCAATCA-(3)-ACGATCA | mll5707 |
| -107 | 5.2 | ATAAACG-(3)-AAGATCG | ||
| -103 | 6.7 | ACGATCA-(3)-TCGATCA | ||
| -62 | 6.7 | ATGATCG-(3)-ATGATTG | ||
| Rhizobium etli CFN 42 | ||||
|
Position: -115
Score: 6.42506 Sequence: TCAATCG-(3)-ACGATCA
Position: -105
Score: 6.40869 Sequence: ACGATCA-(3)-TCGATTA
Position: -64
Score: 6.65774 Sequence: ATGATCG-(3)-ATGATTG
Locus tag: RHE_PE00290
Name: rhaR Funciton: Predicted transcriptional regulator for rhamnose utilization, DeoR family
Locus tag: RHE_PE00289
Name: rhaF Funciton: L-rhamnose ABC transporter, periplasmic rhamnose-binding protein
Locus tag: RHE_PE00288
Name: rhaG Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component
Locus tag: RHE_PE00287
Name: rhaH Funciton: L-rhamnose ABC transporter, permease component 1
Locus tag: RHE_PE00286
Name: rhaJ Funciton: L-rhamnose ABC transporter, permease component 2
Locus tag: RHE_PE00285
Name: rhaM Funciton: L-rhamnose mutarotase
Locus tag: RHE_PE00284
Name: rhaK Funciton: putative rhamnulokinase |
||||
| rhaR-rhaF-rhaG-rhaH-rhaJ-rhaM-rhaK | -115 | 6.4 | TCAATCG-(3)-ACGATCA | RHE_PE00290 |
| -105 | 6.4 | ACGATCA-(3)-TCGATTA | ||
| -64 | 6.7 | ATGATCG-(3)-ATGATTG | ||
| Rhizobium leguminosarum bv. viciae 3841 | ||||
|
Position: -113
Score: 6.42506 Sequence: TCAATCG-(3)-ACGATCA
Position: -103
Score: 6.40869 Sequence: ACGATCA-(3)-TCGATTA
Position: -72
Score: 5.637 Sequence: ATGAAAA-(3)-ATGATCG
Position: -62
Score: 6.65774 Sequence: ATGATCG-(3)-TTGATTG
Locus tag: pRL110414
Name: rhaR Funciton: Predicted transcriptional regulator for rhamnose utilization, DeoR family
Locus tag: pRL110413
Name: rhaF Funciton: L-rhamnose ABC transporter, periplasmic rhamnose-binding protein
Locus tag: pRL110412
Name: rhaG Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component
Locus tag: pRL110411
Name: rhaH Funciton: L-rhamnose ABC transporter, permease component 1
Locus tag: pRL110410
Name: rhaJ Funciton: L-rhamnose ABC transporter, permease component 2
Locus tag: pRL110409
Name: rhaM Funciton: L-rhamnose mutarotase
Locus tag: pRL110408
Name: rhaK Funciton: putative rhamnulokinase |
||||
| rhaR-rhaF-rhaG-rhaH-rhaJ-rhaM-rhaK | -113 | 6.4 | TCAATCG-(3)-ACGATCA | pRL110414 |
| -103 | 6.4 | ACGATCA-(3)-TCGATTA | ||
| -72 | 5.6 | ATGAAAA-(3)-ATGATCG | ||
| -62 | 6.7 | ATGATCG-(3)-TTGATTG | ||
| Rhizobium sp. NGR234 | ||||
|
Position: -114
Score: 6.3558 Sequence: TCAATCA-(3)-ACGATCA
Position: -73
Score: 5.637 Sequence: ATGAAAA-(3)-ATGATCG
Position: -63
Score: 6.09321 Sequence: ATGATCG-(3)-CTGATTG
Position: -53
Score: 5.26477 Sequence: CTGATTG-(3)-ATGCTCG
Locus tag: NGR_c02440
Name: rhaR Funciton: Predicted transcriptional regulator for rhamnose utilization, DeoR family
Locus tag: NGR_c02450
Name: rhaF Funciton: L-rhamnose ABC transporter, periplasmic rhamnose-binding protein
Locus tag: NGR_c02460
Name: rhaG Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component
Locus tag: NGR_c02470
Name: rhaH Funciton: L-rhamnose ABC transporter, permease component 1
Locus tag: NGR_c02480
Name: rhaJ Funciton: L-rhamnose ABC transporter, permease component 2
Locus tag: NGR_c02490
Name: rhaM Funciton: L-rhamnose mutarotase
Locus tag: NGR_c02500
Name: rhaK Funciton: putative rhamnulokinase |
||||
| rhaR-rhaF-rhaG-rhaH-rhaJ-rhaM-rhaK | -114 | 6.4 | TCAATCA-(3)-ACGATCA | NGR_c02440 |
| -73 | 5.6 | ATGAAAA-(3)-ATGATCG | ||
| -63 | 6.1 | ATGATCG-(3)-CTGATTG | ||
| -53 | 5.3 | CTGATTG-(3)-ATGCTCG | ||
| Sinorhizobium meliloti 1021 | ||||
|
Position: -114
Score: 6.3558 Sequence: TCAATCA-(3)-ACGATCA
Position: -63
Score: 5.83393 Sequence: ATGATTG-(3)-GTGATTG
Position: -53
Score: 5.26477 Sequence: GTGATTG-(3)-ATGCTCG
Locus tag: SMc02323
Name: rhaR Funciton: Predicted transcriptional regulator for rhamnose utilization, DeoR family
Locus tag: SMc02324
Name: rhaF Funciton: L-rhamnose ABC transporter, periplasmic rhamnose-binding protein
Locus tag: SMc02325
Name: rhaG Funciton: L-rhamnose ABC transporter, duplicated ATP-binding component
Locus tag: SMc03000
Name: rhaH Funciton: L-rhamnose ABC transporter, permease component 1
Locus tag: SMc03001
Name: rhaJ Funciton: L-rhamnose ABC transporter, permease component 2
Locus tag: SMc03002
Name: rhaM Funciton: L-rhamnose mutarotase
Locus tag: SMc03003
Name: rhaK Funciton: putative rhamnulokinase |
||||
| rhaR-rhaF-rhaG-rhaH-rhaJ-rhaM-rhaK | -114 | 6.4 | TCAATCA-(3)-ACGATCA | SMc02323 |
| -63 | 5.8 | ATGATTG-(3)-GTGATTG | ||
| -53 | 5.3 | GTGATTG-(3)-ATGCTCG | ||