Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rhiN gene

Properties
Regulog: RhaS - Enterobacteriales
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator
Biological process: Rhamnose utilization
Effector: Rhamnose
Phylum: Proteobacteria
Built upon 31 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -147
Score: 11.0032
Sequence: CTCTTTGTATTTTTGCCA-(15)-TGGCAAAAATGAAAAGGT
Locus tag: CKO_01081
Name: rhiT
Funciton: Rhamnogalacturonide transporter
Locus tag: CKO_01082
Name: rhiN
Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
rhiT-rhiN -147 11 CTCTTTGTATTTTTGCCA-(15)-TGGCAAAAATGAAAAGGT CKO_01081
Enterobacter sp. 638
Position: -146
Score: 11.0743
Sequence: CTCTTTGCATTATTGCCA-(15)-TGGCAGAAACAGAAAGGT
Locus tag: Ent638_2444
Name: rhiT
Funciton: Rhamnogalacturonide transporter
Locus tag: Ent638_2443
Name: rhiN
Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
rhiT-rhiN -146 11.1 CTCTTTGCATTATTGCCA-(15)-TGGCAGAAACAGAAAGGT Ent638_2444
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -123
Score: 10.5761
Sequence: ATCTTCCCTGTGCTGCCA-(15)-TGGCAAAAGCGCAAAGGT
Locus tag: ECA3560
Name: rhiT
Funciton: Rhamnogalacturonide transporter
Locus tag: ECA3559
Name: rhiN
Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
rhiT-rhiN -123 10.6 ATCTTCCCTGTGCTGCCA-(15)-TGGCAAAAGCGCAAAGGT ECA3560
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -157
Score: 10.3497
Sequence: CTCTTTGTCATTTTGCCA-(15)-TGGCAAAAGTACAAAGGT
Locus tag: KPN_02390
Name: rhiT
Funciton: Rhamnogalacturonide transporter
Locus tag: KPN_02389
Name: rhiN
Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
rhiT-rhiN -157 10.3 CTCTTTGTCATTTTGCCA-(15)-TGGCAAAAGTACAAAGGT KPN_02390
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