Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing xylA gene

Properties
Regulog: XylR - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: NrtR
Regulation mode: repressor
Biological process: Xylose utilization
Effector: Xylose
Phylum: Bacteroidetes
Built upon 43 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacteroides cellulosilyticus DSM 14838
Position: -200
Score: 5.6437
Sequence: CTTATTGTACTTCCTACAATTAC
Position: -152
Score: 5.70014
Sequence: CATATTGTACTTTCAACGATAAG
Position: -119
Score: 5.76829
Sequence: GATATTGTAAAATGTACGATATC
Locus tag: BACCELL_04758
Name: xylR
Funciton: Predicted regulator of xylose utilization, NrtR family
Locus tag: BACCELL_04759
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: BACCELL_04760
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: BACCELL_04761
Name: xylE
Funciton: D-xylose proton-symporter XylE
xylR-xylB-xylA-xylE -200 5.6 CTTATTGTACTTCCTACAATTAC BACCELL_04758
-152 5.7 CATATTGTACTTTCAACGATAAG
-119 5.8 GATATTGTAAAATGTACGATATC
Bacteroides dorei DSM 17855
Position: -103
Score: 5.1313
Sequence: TATATTGTAGTGTATATGATAAG
Position: -70
Score: 4.85895
Sequence: CATATTGTATAATAGATGATATT
Locus tag: BACDOR_00865
Name: xylR
Funciton: Predicted regulator of xylose utilization, NrtR family
Locus tag: BACDOR_00866
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: BACDOR_00867
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
xylR-xylB-xylA -103 5.1 TATATTGTAGTGTATATGATAAG BACDOR_00865
-70 4.9 CATATTGTATAATAGATGATATT
Bacteroides eggerthii DSM 20697
Position: -208
Score: 5.10241
Sequence: GTTATTGTGCCTATTACAATTAC
Position: -161
Score: 6.10023
Sequence: CATATTGTATTTTGTACGATAAC
Position: -128
Score: 5.42431
Sequence: GATATTGTAAAAGATATGATATG
Locus tag: BACEGG_02642
Name: xylR
Funciton: Predicted regulator of xylose utilization, NrtR family
Locus tag: BACEGG_02643
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: BACEGG_02644
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: BACEGG_02645
Name: xylE
Funciton: D-xylose proton-symporter XylE
xylR-xylB-xylA-xylE -208 5.1 GTTATTGTGCCTATTACAATTAC BACEGG_02642
-161 6.1 CATATTGTATTTTGTACGATAAC
-128 5.4 GATATTGTAAAAGATATGATATG
Bacteroides fragilis NCTC 9343
Position: -280
Score: 5.40138
Sequence: CATACCCTATAAAATACAATAAG
Position: -197
Score: 5.09863
Sequence: CTTTCTGTACTTTCTACAATTAC
Position: -150
Score: 5.66167
Sequence: CATATTGTTATCGATACAATAAG
Position: -117
Score: 5.39923
Sequence: CTTAGTGTAAAATTTACGATATG
Locus tag: BF2354
Name: xylR
Funciton: Predicted regulator of xylose utilization, NrtR family
Locus tag: BF2355
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: BF2356
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: BF2357
Name: xylE
Funciton: D-xylose proton-symporter XylE
xylR-xylB-xylA-xylE -280 5.4 CATACCCTATAAAATACAATAAG BF2354
-197 5.1 CTTTCTGTACTTTCTACAATTAC
-150 5.7 CATATTGTTATCGATACAATAAG
-117 5.4 CTTAGTGTAAAATTTACGATATG
Bacteroides ovatus ATCC 8483
Position: -279
Score: 6.05913
Sequence: CATATCGTTTAAAATACAATAAG
Position: -195
Score: 5.64662
Sequence: GTTTTTGTACTTTATACAATTAC
Position: -149
Score: 5.42208
Sequence: CATATTGTAATTCGTAAGATAAC
Position: -116
Score: 5.4423
Sequence: CATATTGTAGAATGTATGATATG
Locus tag: BACOVA_02532
Name: xylR
Funciton: Predicted regulator of xylose utilization, NrtR family
Locus tag: BACOVA_02533
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: BACOVA_02534
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: BACOVA_02535
Name: xylE
Funciton: D-xylose proton-symporter XylE
xylR-xylB-xylA-xylE -279 6.1 CATATCGTTTAAAATACAATAAG BACOVA_02532
-195 5.6 GTTTTTGTACTTTATACAATTAC
-149 5.4 CATATTGTAATTCGTAAGATAAC
-116 5.4 CATATTGTAGAATGTATGATATG
Bacteroides plebeius DSM 17135
Position: -147
Score: 5.76348
Sequence: CATATTGTATGAACTACAAAAAC
Position: -114
Score: 5.20014
Sequence: GATATTGTATCAAATAAGATATT
Locus tag: BACPLE_02263
Name: xylR
Funciton: Predicted regulator of xylose utilization, NrtR family
Locus tag: BACPLE_02264
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: BACPLE_02265
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: BACPLE_02266
Name: xylE
Funciton: D-xylose proton-symporter XylE
xylR-xylB-xylA-xylE -147 5.8 CATATTGTATGAACTACAAAAAC BACPLE_02263
-114 5.2 GATATTGTATCAAATAAGATATT
Bacteroides thetaiotaomicron VPI-5482
Position: -280
Score: 5.88067
Sequence: GATATCGTTTGAAATACAATAAG
Position: -196
Score: 5.6939
Sequence: CTTTTTGTACTTTATACAATTAC
Position: -150
Score: 5.07643
Sequence: CATATTGTAATTCAGAAGATAAC
Position: -117
Score: 5.4423
Sequence: CATATTGTAGATTGTATGATATG
Locus tag: BT0791
Name: xylR
Funciton: Predicted regulator of xylose utilization, NrtR family
Locus tag: BT0792
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: BT0793
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: BT0794
Name: xylE
Funciton: D-xylose proton-symporter XylE
xylR-xylB-xylA-xylE -280 5.9 GATATCGTTTGAAATACAATAAG BT0791
-196 5.7 CTTTTTGTACTTTATACAATTAC
-150 5.1 CATATTGTAATTCAGAAGATAAC
-117 5.4 CATATTGTAGATTGTATGATATG
Bacteroides uniformis ATCC 8492
Position: -209
Score: 5.69098
Sequence: CTTATTGTACTTCCTACAATTAG
Position: -161
Score: 5.92556
Sequence: CATATTGTATTCCATACGATAAC
Position: -128
Score: 5.65223
Sequence: GATATTGTATAAAGTAAGATATG
Locus tag: BACUNI_00695
Name: xylR
Funciton: Predicted regulator of xylose utilization, NrtR family
Locus tag: BACUNI_00694
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: BACUNI_00693
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: BACUNI_00692
Name: xylE
Funciton: D-xylose proton-symporter XylE
xylR-xylB-xylA-xylE -209 5.7 CTTATTGTACTTCCTACAATTAG BACUNI_00695
-161 5.9 CATATTGTATTCCATACGATAAC
-128 5.7 GATATTGTATAAAGTAAGATATG
Bacteroides vulgatus ATCC 8482
Position: -169
Score: 5.1313
Sequence: TATATTGTAGTGTATATGATAAG
Position: -136
Score: 4.52607
Sequence: GATATTGTATGATGGATGATATT
Locus tag: BVU_3955
Name: xylR
Funciton: Predicted regulator of xylose utilization, NrtR family
Locus tag: BVU_3954
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: BVU_3953
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
xylR-xylB-xylA -169 5.1 TATATTGTAGTGTATATGATAAG BVU_3955
-136 4.5 GATATTGTATGATGGATGATATT
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