Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing GH43 gene

Properties
Regulog: HTCS_Ara-1 - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: activator
Biological process: Arabinan utilization
Effector: Arabinan
Phylum: Bacteroidetes
Built upon 12 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacteroides cellulosilyticus DSM 14838
Position: -268
Score: 7.75675
Sequence: TGTCCACCTCAAATGTTCATTTGTCCACCT
Locus tag: BACCELL_05304
Name: abn2
Funciton: Arabinan endo-1,5-alpha-L-arabinosidase
Locus tag: BACCELL_05303
Name: abf2
Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55)
Locus tag: BACCELL_05302
Name: GH43
Funciton: Hypothetical glycoside hydrolase, family 43, similar to arabinosidase
abn2-abf2-GH43 -268 7.8 TGTCCACCTCAAATGTTCATTTGTCCACCT BACCELL_05304
Bacteroides eggerthii DSM 20697
Position: -285
Score: 7.43576
Sequence: TGTCCACCTTAAAAGGTCATATATCCACCT
Locus tag: BACEGG_01542
Name: abn2
Funciton: Arabinan endo-1,5-alpha-L-arabinosidase
Locus tag: BACEGG_01543
Name: abf2
Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55)
Locus tag: BACEGG_01544
Name: GH43
Funciton: Hypothetical glycoside hydrolase, family 43, similar to arabinosidase
abn2-abf2-GH43 -285 7.4 TGTCCACCTTAAAAGGTCATATATCCACCT BACEGG_01542
Bacteroides thetaiotaomicron VPI-5482
Position: -69
Score: 7.00789
Sequence: TGTCCACCAATCGTGTTCGTATGTCCACCT
Locus tag: BT0367
Name: abn2
Funciton: Arabinan endo-1,5-alpha-L-arabinosidase
Locus tag: BT0368
Name: abf2
Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55)
Locus tag: BT0369
Name: GH43
Funciton: Hypothetical glycoside hydrolase, family 43, similar to arabinosidase
abn2-abf2-GH43 -69 7 TGTCCACCAATCGTGTTCGTATGTCCACCT BT0367
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