Orthologous regulated operons containing ccmH gene
| Regulog: | Fnr - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | activator (repressor) |
| Biological process: | Energy metabolism; Anaerobic metabolism |
| Effector: | Oxygen |
| Phylum: | Gammaproteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Citrobacter koseri ATCC BAA-895 | ||||
|
Position: -19
Score: 3.29 Sequence: TTTATAAGGATAAA
Locus tag: CKO_00581
Name: ccmF Funciton: Cytochrome c heme lyase subunit CcmF
Locus tag: CKO_00582
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: CKO_00583
Name: null Funciton: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH |
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| ccmF-ccmG-CKO_00583 | -19 | 3.3 | TTTATAAGGATAAA | CKO_00581 |
| Edwardsiella tarda EIB202 | ||||
|
Position: -114
Score: 3.52 Sequence: TTATTGTATATAAA
Locus tag: ETAE_2459
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: ETAE_2458
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: ETAE_2457
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: ETAE_2456
Name: ccmF Funciton: Cytochrome c heme lyase subunit CcmF
Locus tag: ETAE_2455
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: ETAE_2454
Name: ccmH Funciton: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH
Locus tag: ETAE_2453
Name: ccmI Funciton: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH |
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| ccmC-ccmD-ccmE-ccmF-ccmG-ccmH-ccmI | -114 | 3.5 | TTATTGTATATAAA | ETAE_2459 |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ||||
|
Position: -106
Score: 4.4 Sequence: TTGATCTCAATAAA
Locus tag: ECA1882
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: ECA1883
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: ECA1884
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: ECA1885
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: ECA1886
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: ECA1887
Name: ccmF Funciton: Cytochrome c heme lyase subunit CcmF
Locus tag: ECA1888
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: ECA1889
Name: ccmH1 Funciton: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH
Locus tag: ECA1890
Name: ccmH2 Funciton: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH |
||||
| ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG-ccmH1-ccmH2 | -106 | 4.4 | TTGATCTCAATAAA | ECA1882 |
| Escherichia coli str. K-12 substr. MG1655 | ||||
|
Position: -46
Score: 3.24 Sequence: TTGGTCGCTCTCAA
Locus tag: b2208
Name: napF Funciton: Ferredoxin-type protein NapF (periplasmic nitrate reductase)
Locus tag: b2207
Name: napD Funciton: Periplasmic nitrate reductase component NapD
Locus tag: b2206
Name: napA Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: b2205
Name: napG Funciton: Ferredoxin-type protein NapG (periplasmic nitrate reductase)
Locus tag: b2204
Name: napH Funciton: Polyferredoxin NapH (periplasmic nitrate reductase)
Locus tag: b2203
Name: napB Funciton: Nitrate reductase cytochrome c550-type subunit
Locus tag: b2202
Name: napC Funciton: Cytochrome c-type protein NapC
Locus tag: b2201
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: b2200
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: b2199
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: b2198
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: b2197
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: b2196
Name: ccmF Funciton: Cytochrome c heme lyase subunit CcmF
Locus tag: b2195
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: b2194
Name: ccmH Funciton: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH |
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| napF-napD-napA-napG-napH-napB-napC-ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG-ccmH | -46 | 3.2 | TTGGTCGCTCTCAA | b2208 |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | ||||
|
Position: -326
Score: 3.37 Sequence: GTGATACAAGTCAC
Locus tag: KPN_02084
Name: null Funciton: hypothetical protein
Locus tag: KPN_02083
Name: null Funciton: Monooxygenase, FAD-binding; Glucose-methanol-choline oxidoreductase
Locus tag: KPN_02082
Name: null Funciton: gluconate dehydrogenase cytochrome c subunit, putative
Locus tag: KPN_02081
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: KPN_02080
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: KPN_02079
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: KPN_02078
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: KPN_02077
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: KPN_02076
Name: ccmF Funciton: Cytochrome c heme lyase subunit CcmF
Locus tag: KPN_02075
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: KPN_02074
Name: ccmH Funciton: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH
Locus tag: KPN_02073
Name: ccmH Funciton: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH |
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| KPN_02084-KPN_02083-KPN_02082-ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG-ccmH-ccmH | -326 | 3.4 | GTGATACAAGTCAC | KPN_02084 |
| Salmonella typhimurium LT2 | ||||
|
Position: -110
Score: 4.72 Sequence: TTGATACCAATCAA
Locus tag: STM3820
Name: null Funciton: Cytochrome c551 peroxidase (EC 1.11.1.5)
Locus tag: STM3819
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: STM3818
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: STM3817
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: STM3816
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: STM3815
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: STM3814
Name: ccmF Funciton: Cytochrome c heme lyase subunit CcmF
Locus tag: STM3813
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: STM3812
Name: ccmH Funciton: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH |
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| STM3820-ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG-ccmH | -110 | 4.7 | TTGATACCAATCAA | STM3820 |
| Yersinia pestis KIM | ||||
|
Position: -302
Score: 3.97 Sequence: TGGATTTTTAACAA
Locus tag: y1567
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: y1568
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: y1569
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: y1570
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: y1571
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: y1572
Name: ccmF Funciton: Cytochrome c heme lyase subunit CcmF
Locus tag: y1573
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: y1574
Name: null Funciton: Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH |
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| ccmA-ccmB-ccmC-ccmD-ccmE-ccmF-ccmG-y1574 | -302 | 4 | TGGATTTTTAACAA | y1567 |