Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing focA gene

Properties
Regulog: Fnr - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Energy metabolism; Anaerobic metabolism
Effector: Oxygen
Phylum: Gammaproteobacteria
Built upon 685 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -116
Score: 4.92
Sequence: ATGATCTATATCAA
Locus tag: CKO_02167
Name: focA
Funciton: Formate efflux transporter (TC 2.A.44 family)
Locus tag: CKO_02168
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
focA-pflB -116 4.9 ATGATCTATATCAA CKO_02167
Edwardsiella tarda EIB202
Position: -117
Score: 4.2
Sequence: ATGATCCATGTCAA
Locus tag: ETAE_2181
Name: focA
Funciton: Formate efflux transporter (TC 2.A.44 family)
Locus tag: ETAE_2182
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
focA-pflB -117 4.2 ATGATCCATGTCAA ETAE_2181
Enterobacter sp. 638
Position: -74
Score: 4.92
Sequence: ATGATCTATATCAA
Locus tag: Ent638_1424
Name: focA
Funciton: Formate efflux transporter (TC 2.A.44 family)
Locus tag: Ent638_1423
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
focA-pflB -74 4.9 ATGATCTATATCAA Ent638_1424
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -228
Score: 4.01
Sequence: ATGATTTTTATTAA
Position: -75
Score: 4.48
Sequence: ATGATCCACATCAA
Locus tag: ECA2596
Name: focA
Funciton: Formate efflux transporter (TC 2.A.44 family)
Locus tag: ECA2597
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
focA-pflB -228 4 ATGATTTTTATTAA ECA2596
-75 4.5 ATGATCCACATCAA
Escherichia coli str. K-12 substr. MG1655
Position: -74
Score: 4.92
Sequence: ATGATCTATATCAA
Locus tag: b0904
Name: focA
Funciton: Formate efflux transporter (TC 2.A.44 family)
Locus tag: b0903
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
focA-pflB -74 4.9 ATGATCTATATCAA b0904
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -117
Score: 4.92
Sequence: ATGATCTATATCAA
Locus tag: KPN_00932
Name: focA
Funciton: Formate efflux transporter (TC 2.A.44 family)
Locus tag: KPN_00931
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
focA-pflB -117 4.9 ATGATCTATATCAA KPN_00932
Photorhabdus luminescens subsp. laumondii TTO1
Position: -267
Score: 4.07
Sequence: TTTATTTGCAACAA
Position: -159
Score: 4.66
Sequence: TTTATTAAAATCAA
Position: -84
Score: 4.92
Sequence: ATGATCTATATCAA
Locus tag: plu1614
Name: focA
Funciton: Formate efflux transporter (TC 2.A.44 family)
Locus tag: plu1613
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
focA-pflB -267 4.1 TTTATTTGCAACAA plu1614
-159 4.7 TTTATTAAAATCAA
-84 4.9 ATGATCTATATCAA
Proteus mirabilis HI4320
Position: -159
Score: 4.12
Sequence: TTATTATTAATCAA
Position: -85
Score: 4.51
Sequence: ATGATCCATATCAA
Locus tag: PMI0706
Name: focA
Funciton: Formate efflux transporter (TC 2.A.44 family)
Locus tag: PMI0705
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
focA-pflB -159 4.1 TTATTATTAATCAA PMI0706
-85 4.5 ATGATCCATATCAA
Salmonella typhimurium LT2
Position: -74
Score: 4.92
Sequence: ATGATCTATATCAA
Locus tag: STM0974
Name: focA
Funciton: Formate efflux transporter (TC 2.A.44 family)
Locus tag: STM0973
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
focA-pflB -74 4.9 ATGATCTATATCAA STM0974
Serratia proteamaculans 568
Position: -143
Score: 3.91
Sequence: ATAATTTAACTCAA
Position: -81
Score: 4.6
Sequence: ATGATCCAAATCAA
Locus tag: Spro_1703
Name: focA
Funciton: Formate efflux transporter (TC 2.A.44 family)
Locus tag: Spro_1702
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
focA-pflB -143 3.9 ATAATTTAACTCAA Spro_1703
-81 4.6 ATGATCCAAATCAA
Yersinia pestis KIM
Position: -80
Score: 4.51
Sequence: ATGATCCATATCAA
Locus tag: y2789
Name: focA
Funciton: Formate efflux transporter (TC 2.A.44 family)
Locus tag: y2790
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
focA-pflB -80 4.5 ATGATCCATATCAA y2789
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