Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nrdD gene

Properties
Regulog: NrdR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Firmicutes
Built upon 81 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Lactobacillus acidophilus NCFM
Position: -58
Score: 4.50871
Sequence: ATACAAGATGTTGTGC
Locus tag: LBA0160
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: LBA0161
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -58 4.5 ATACAAGATGTTGTGC LBA0160
Lactobacillus casei ATCC 334
Position: -133
Score: 4.97235
Sequence: ACACACTATATAGTGT
Position: -131
Score: 5.49294
Sequence: ACACTATATAGTGTAT
Locus tag: LSEI_0131
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
nrdD -133 5 ACACACTATATAGTGT LSEI_0131
-131 5.5 ACACTATATAGTGTAT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
Position: -173
Score: 5.30505
Sequence: CCACAATATCTGGTAT
Position: -131
Score: 4.55242
Sequence: AAACAAGATGTAGTGG
Locus tag: LBUL_0185
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: LBUL_0186
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -173 5.3 CCACAATATCTGGTAT LBUL_0185
-131 4.6 AAACAAGATGTAGTGG
Lactobacillus fermentum IFO 3956
Position: -99
Score: 4.73957
Sequence: CCACAAGATCTTGTAA
Position: -68
Score: 5.27768
Sequence: AAACTATATGTTGTGT
Locus tag: LAF_1376
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: LAF_1375
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -99 4.7 CCACAAGATCTTGTAA LAF_1376
-68 5.3 AAACTATATGTTGTGT
Lactobacillus helveticus DPC 4571
Position: -56
Score: 5.10078
Sequence: ATACAAGATGTTGTAT
Locus tag: lhv_0169
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: lhv_0170
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -56 5.1 ATACAAGATGTTGTAT lhv_0169
Lactobacillus johnsonii NCC 533
Position: -63
Score: 4.60636
Sequence: CTACAATATCATGTAG
Locus tag: LJ0137
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: LJ0138
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -63 4.6 CTACAATATCATGTAG LJ0137
Lactobacillus plantarum WCFS1
Position: -80
Score: 5.51537
Sequence: CTACTATATATAGTAT
Position: -49
Score: 4.38667
Sequence: GCACTATCAATTGTAT
Locus tag: lp_2932
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: lp_2931
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -80 5.5 CTACTATATATAGTAT lp_2932
-49 4.4 GCACTATCAATTGTAT
Lactobacillus reuteri JCM 1112
Position: -92
Score: 5.31159
Sequence: CCACAACATATAGTGT
Locus tag: LAR_1249
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: LAR_1248
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -92 5.3 CCACAACATATAGTGT LAR_1249
Lactobacillus rhamnosus GG
Position: -131
Score: 5.49294
Sequence: CCACTATATAGTGTAT
Locus tag: LGG_00138
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
nrdD -131 5.5 CCACTATATAGTGTAT LGG_00138
Lactobacillus sakei subsp. sakei 23K
Position: -75
Score: 5.10679
Sequence: ACACTATATATAGTTG
Locus tag: LSA1459
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: LSA1458
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -75 5.1 ACACTATATATAGTTG LSA1459
Lactobacillus salivarius subsp. salivarius UCC118
Position: -108
Score: 5.53681
Sequence: ATACTATATATAGTGT
Position: -76
Score: 5.8534
Sequence: ACACTATATATTGTAT
Locus tag: LSL_1332
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: LSL_1331
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
nrdD-nrdG -108 5.5 ATACTATATATAGTGT LSL_1332
-76 5.9 ACACTATATATTGTAT
Pediococcus pentosaceus ATCC 25745
Position: -133
Score: 5.71156
Sequence: ATACTATATATTGTAT
Locus tag: PEPE_0483
Name: mntH2
Funciton: Predicted manganese transport protein
Locus tag: PEPE_0484
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: PEPE_0485
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
mntH2-nrdD-nrdG -133 5.7 ATACTATATATTGTAT PEPE_0483
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