Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ybiY gene

Properties
Regulog: Fnr - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Energy metabolism; Anaerobic metabolism
Effector: Oxygen
Phylum: Gammaproteobacteria
Built upon 685 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -70
Score: 4.14
Sequence: TTGACCTGCGTCAA
Locus tag: CKO_02286
Name: ybiY
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Locus tag: CKO_02287
Name: ybiW
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
ybiY-ybiW -70 4.1 TTGACCTGCGTCAA CKO_02286
Edwardsiella tarda EIB202
Position: -71
Score: 5.15
Sequence: TTGATCAAAATCAA
Locus tag: ETAE_0451
Name: ybiY
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Locus tag: ETAE_0450
Name: ybiW
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
ybiY-ybiW -71 5.2 TTGATCAAAATCAA ETAE_0451
Enterobacter sp. 638
Position: -68
Score: 4.41
Sequence: TTGACGCACATCAA
Locus tag: Ent638_1318
Name: ybiY
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Locus tag: Ent638_1317
Name: ybiW
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
ybiY-ybiW -68 4.4 TTGACGCACATCAA Ent638_1318
Escherichia coli str. K-12 substr. MG1655
Position: -67
Score: 4.41
Sequence: TTGACGCACATCAA
Locus tag: b0824
Name: ybiY
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Locus tag: b0823
Name: ybiW
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
ybiY-ybiW -67 4.4 TTGACGCACATCAA b0824
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -69
Score: 4.7
Sequence: TTGATTTGCGTCAA
Locus tag: KPN_00858
Name: ybiY
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Locus tag: KPN_00857
Name: ybiW
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
ybiY-ybiW -69 4.7 TTGATTTGCGTCAA KPN_00858
Salmonella typhimurium LT2
Position: -69
Score: 4.41
Sequence: TTGACGCACATCAA
Locus tag: STM0844
Name: ybiY
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Locus tag: STM0843
Name: ybiW
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
ybiY-ybiW -69 4.4 TTGACGCACATCAA STM0844
Serratia proteamaculans 568
Position: -76
Score: 5.06
Sequence: TTGATCGAAATCAA
Locus tag: Spro_2641
Name: ybiY
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Locus tag: Spro_2642
Name: ybiW
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
ybiY-ybiW -76 5.1 TTGATCGAAATCAA Spro_2641
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