Orthologous regulated operons containing hscB gene
| Regulog: | IscR - Comamonadaceae |
| Regulator type: | Transcription factor |
| Regulator family: | Rrf2 |
| Regulation mode: | activator (repressor) |
| Biological process: | Iron-sulfur cluster biogenesis |
| Effector: | Iron-sulfur cluster redox state |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Acidovorax avenae subsp. citrulli AAC00-1 | ||||
|
Position: -207
Score: 5.71904 Sequence: TTACCCGACAAAAACAATAGGGTTT
Position: -176
Score: 5.42735 Sequence: ATACTTGGGCGCAACACTCAAGAAA
Locus tag: Aave_2442
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Aave_2443
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Aave_2444
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Aave_2445
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Aave_2446
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Aave_2447
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Aave_2448
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -207 | 5.7 | TTACCCGACAAAAACAATAGGGTTT | Aave_2442 |
| -176 | 5.4 | ATACTTGGGCGCAACACTCAAGAAA | ||
| Acidovorax sp. JS42 | ||||
|
Position: -189
Score: 5.64608 Sequence: TTACCCGATAAAATTAATAGGGATT
Position: -158
Score: 5.83281 Sequence: ATACTTGTCTCAAATACTCAAGAAA
Locus tag: Ajs_2145
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Ajs_2144
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Ajs_2143
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Ajs_2142
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Ajs_2141
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Ajs_2140
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Ajs_2139
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -189 | 5.6 | TTACCCGATAAAATTAATAGGGATT | Ajs_2145 |
| -158 | 5.8 | ATACTTGTCTCAAATACTCAAGAAA | ||
| Comamonas testosteroni KF-1 | ||||
|
Position: -182
Score: 5.75193 Sequence: TTACCCGACAAAATTGATGGGGAAT
Position: -152
Score: 5.62556 Sequence: ATACTCGCGTCAAACACTCAACAAC
Locus tag: CtesDRAFT_1260
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: CtesDRAFT_1261
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: CtesDRAFT_1262
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: CtesDRAFT_1263
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: CtesDRAFT_1264
Name: hscB Funciton: Chaperone protein HscB
Locus tag: CtesDRAFT_1265
Name: hscA Funciton: Chaperone protein HscA
Locus tag: CtesDRAFT_1266
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -182 | 5.8 | TTACCCGACAAAATTGATGGGGAAT | CtesDRAFT_1260 |
| -152 | 5.6 | ATACTCGCGTCAAACACTCAACAAC | ||
| Delftia acidovorans SPH-1 | ||||
|
Position: -192
Score: 5.75193 Sequence: TTACCCGACAAAATTGATGGGGAAT
Locus tag: Daci_4000
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Daci_3999
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Daci_3998
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Daci_3997
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Daci_3996
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Daci_3995
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Daci_3994
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -192 | 5.8 | TTACCCGACAAAATTGATGGGGAAT | Daci_4000 |
| Leptothrix cholodnii SP-6 | ||||
|
Position: -109
Score: 6.13658 Sequence: ATAATCGAGTAAAACACTCGGGAAA
Locus tag: Lcho_1048
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Lcho_1047
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Lcho_1046
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Lcho_1045
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Lcho_1044
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Lcho_1043
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Lcho_1042
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -109 | 6.1 | ATAATCGAGTAAAACACTCGGGAAA | Lcho_1048 |
| Methylibium petroleiphilum PM1 | ||||
|
Position: -98
Score: 5.10354 Sequence: ATAATTGAGCTATTCAGTCGGGATT
Locus tag: Mpe_A2263
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Mpe_A2262
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Mpe_A2261
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Mpe_A2260
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Mpe_A2259
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Mpe_A2258
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Mpe_A2257
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -98 | 5.1 | ATAATTGAGCTATTCAGTCGGGATT | Mpe_A2263 |
| Polaromonas naphthalenivorans CJ2 | ||||
|
Position: -152
Score: 6.26727 Sequence: ATACTTGACGAAATTAGTCAAGAAC
Locus tag: Pnap_2291
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Pnap_2290
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Pnap_2289
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Pnap_2288
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Pnap_2287
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Pnap_2286
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Pnap_2285
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -152 | 6.3 | ATACTTGACGAAATTAGTCAAGAAC | Pnap_2291 |
| Polaromonas sp. JS666 | ||||
|
Position: -154
Score: 6.28806 Sequence: ATACTTGACGAAAACAGTCAGGAAC
Locus tag: Bpro_2177
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Bpro_2178
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Bpro_2179
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Bpro_2180
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Bpro_2181
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Bpro_2182
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Bpro_2183
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -154 | 6.3 | ATACTTGACGAAAACAGTCAGGAAC | Bpro_2177 |
| Rhodoferax ferrireducens DSM 15236 | ||||
|
Position: -82
Score: 5.24473 Sequence: TTACCCGAGTAAATTACTTGGTTTC
Position: -52
Score: 5.5616 Sequence: ATACTCAACTATATTAGTCAAGTAA
Locus tag: Rfer_2176
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Rfer_2177
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Rfer_2178
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Rfer_2179
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Rfer_2180
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Rfer_2181
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Rfer_2182
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
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| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -82 | 5.2 | TTACCCGAGTAAATTACTTGGTTTC | Rfer_2176 |
| -52 | 5.6 | ATACTCAACTATATTAGTCAAGTAA | ||
| Variovorax paradoxus S110 | ||||
|
Position: -165
Score: 5.85685 Sequence: ATACTTGAGCGAAATACTCAACAAC
Position: -152
Score: 5.41072 Sequence: ATACTCAACAACAACAAAAAAGAAC
Locus tag: Vapar_2141
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Vapar_2142
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Vapar_2143
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Vapar_2144
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Vapar_2145
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Vapar_2146
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Vapar_2147
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
||||
| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -165 | 5.9 | ATACTTGAGCGAAATACTCAACAAC | Vapar_2141 |
| -152 | 5.4 | ATACTCAACAACAACAAAAAAGAAC | ||
| Verminephrobacter eiseniae EF01-2 | ||||
|
Position: -216
Score: 4.21891 Sequence: TAATCCGACAAATTTGATAAGGATT
Locus tag: Veis_2372
Name: iscR Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Veis_2373
Name: iscS Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Veis_2374
Name: iscU Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Veis_2375
Name: iscA Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Veis_2376
Name: hscB Funciton: Chaperone protein HscB
Locus tag: Veis_2377
Name: hscA Funciton: Chaperone protein HscA
Locus tag: Veis_2378
Name: fdx Funciton: ferredoxin, 2Fe-2S type, ISC system |
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| iscR-iscS-iscU-iscA-hscB-hscA-fdx | -216 | 4.2 | TAATCCGACAAATTTGATAAGGATT | Veis_2372 |