Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing iscU gene

Properties
Regulog: IscR - Comamonadaceae
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: activator (repressor)
Biological process: Iron-sulfur cluster biogenesis
Effector: Iron-sulfur cluster redox state
Phylum: Proteobacteria
Built upon 16 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Acidovorax avenae subsp. citrulli AAC00-1
Position: -207
Score: 5.71904
Sequence: TTACCCGACAAAAACAATAGGGTTT
Position: -176
Score: 5.42735
Sequence: ATACTTGGGCGCAACACTCAAGAAA
Locus tag: Aave_2442
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Aave_2443
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Aave_2444
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Aave_2445
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Aave_2446
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Aave_2447
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Aave_2448
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -207 5.7 TTACCCGACAAAAACAATAGGGTTT Aave_2442
-176 5.4 ATACTTGGGCGCAACACTCAAGAAA
Acidovorax sp. JS42
Position: -189
Score: 5.64608
Sequence: TTACCCGATAAAATTAATAGGGATT
Position: -158
Score: 5.83281
Sequence: ATACTTGTCTCAAATACTCAAGAAA
Locus tag: Ajs_2145
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Ajs_2144
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Ajs_2143
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Ajs_2142
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Ajs_2141
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Ajs_2140
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Ajs_2139
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -189 5.6 TTACCCGATAAAATTAATAGGGATT Ajs_2145
-158 5.8 ATACTTGTCTCAAATACTCAAGAAA
Comamonas testosteroni KF-1
Position: -182
Score: 5.75193
Sequence: TTACCCGACAAAATTGATGGGGAAT
Position: -152
Score: 5.62556
Sequence: ATACTCGCGTCAAACACTCAACAAC
Locus tag: CtesDRAFT_1260
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: CtesDRAFT_1261
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: CtesDRAFT_1262
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: CtesDRAFT_1263
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: CtesDRAFT_1264
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: CtesDRAFT_1265
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: CtesDRAFT_1266
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -182 5.8 TTACCCGACAAAATTGATGGGGAAT CtesDRAFT_1260
-152 5.6 ATACTCGCGTCAAACACTCAACAAC
Delftia acidovorans SPH-1
Position: -192
Score: 5.75193
Sequence: TTACCCGACAAAATTGATGGGGAAT
Locus tag: Daci_4000
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Daci_3999
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Daci_3998
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Daci_3997
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Daci_3996
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Daci_3995
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Daci_3994
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -192 5.8 TTACCCGACAAAATTGATGGGGAAT Daci_4000
Leptothrix cholodnii SP-6
Position: -109
Score: 6.13658
Sequence: ATAATCGAGTAAAACACTCGGGAAA
Locus tag: Lcho_1048
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Lcho_1047
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Lcho_1046
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Lcho_1045
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Lcho_1044
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Lcho_1043
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Lcho_1042
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -109 6.1 ATAATCGAGTAAAACACTCGGGAAA Lcho_1048
Methylibium petroleiphilum PM1
Position: -98
Score: 5.10354
Sequence: ATAATTGAGCTATTCAGTCGGGATT
Locus tag: Mpe_A2263
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Mpe_A2262
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Mpe_A2261
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Mpe_A2260
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Mpe_A2259
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Mpe_A2258
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Mpe_A2257
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -98 5.1 ATAATTGAGCTATTCAGTCGGGATT Mpe_A2263
Polaromonas naphthalenivorans CJ2
Position: -152
Score: 6.26727
Sequence: ATACTTGACGAAATTAGTCAAGAAC
Locus tag: Pnap_2291
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Pnap_2290
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Pnap_2289
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Pnap_2288
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Pnap_2287
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Pnap_2286
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Pnap_2285
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -152 6.3 ATACTTGACGAAATTAGTCAAGAAC Pnap_2291
Polaromonas sp. JS666
Position: -154
Score: 6.28806
Sequence: ATACTTGACGAAAACAGTCAGGAAC
Locus tag: Bpro_2177
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Bpro_2178
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Bpro_2179
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Bpro_2180
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Bpro_2181
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Bpro_2182
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Bpro_2183
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -154 6.3 ATACTTGACGAAAACAGTCAGGAAC Bpro_2177
Rhodoferax ferrireducens DSM 15236
Position: -82
Score: 5.24473
Sequence: TTACCCGAGTAAATTACTTGGTTTC
Position: -52
Score: 5.5616
Sequence: ATACTCAACTATATTAGTCAAGTAA
Locus tag: Rfer_2176
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Rfer_2177
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Rfer_2178
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Rfer_2179
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Rfer_2180
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Rfer_2181
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Rfer_2182
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -82 5.2 TTACCCGAGTAAATTACTTGGTTTC Rfer_2176
-52 5.6 ATACTCAACTATATTAGTCAAGTAA
Variovorax paradoxus S110
Position: -165
Score: 5.85685
Sequence: ATACTTGAGCGAAATACTCAACAAC
Position: -152
Score: 5.41072
Sequence: ATACTCAACAACAACAAAAAAGAAC
Locus tag: Vapar_2141
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Vapar_2142
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Vapar_2143
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Vapar_2144
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Vapar_2145
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Vapar_2146
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Vapar_2147
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -165 5.9 ATACTTGAGCGAAATACTCAACAAC Vapar_2141
-152 5.4 ATACTCAACAACAACAAAAAAGAAC
Verminephrobacter eiseniae EF01-2
Position: -216
Score: 4.21891
Sequence: TAATCCGACAAATTTGATAAGGATT
Locus tag: Veis_2372
Name: iscR
Funciton: Iron-sulfur cluster regulator IscR
Locus tag: Veis_2373
Name: iscS
Funciton: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
Locus tag: Veis_2374
Name: iscU
Funciton: Iron-sulfur cluster assembly scaffold protein IscU
Locus tag: Veis_2375
Name: iscA
Funciton: Iron binding protein IscA for iron-sulfur cluster assembly
Locus tag: Veis_2376
Name: hscB
Funciton: Chaperone protein HscB
Locus tag: Veis_2377
Name: hscA
Funciton: Chaperone protein HscA
Locus tag: Veis_2378
Name: fdx
Funciton: ferredoxin, 2Fe-2S type, ISC system
iscR-iscS-iscU-iscA-hscB-hscA-fdx -216 4.2 TAATCCGACAAATTTGATAAGGATT Veis_2372
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