Orthologous regulated operons containing livF gene
| Regulog: | PaaR - Comamonadaceae |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Phenylacetic acid degradation |
| Effector: | Phenylacetyl-CoA |
| Phylum: | Betaproteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Delftia acidovorans SPH-1 | ||||
|
Position: -71
Score: 5.20424 Sequence: ATTTACCGACCATTCGGTAAAT
Locus tag: Daci_0568
Name: paaF Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: Daci_0569
Name: paaY Funciton: thioesterase superfamily protein
Locus tag: Daci_0570
Name: paaK Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
Locus tag: Daci_0571
Name: paaR Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
Locus tag: Daci_0572
Name: livK Funciton: Putative branched-chain amino acid ABC transporter, substrate-binding component
Locus tag: Daci_0573
Name: livH Funciton: Putative branched-chain amino acid ABC transporter, permease component
Locus tag: Daci_0574
Name: livM Funciton: Putative branched-chain amino acid ABC transporter, ATPase component
Locus tag: Daci_0575
Name: livF Funciton: Putative branched-chain amino acid ABC transporter, permease component 2 |
||||
| paaF-paaY-paaK-paaR-livK-livH-livM-livF | -71 | 5.2 | ATTTACCGACCATTCGGTAAAT | Daci_0568 |
| Variovorax paradoxus S110 | ||||
|
Position: -52
Score: 4.62868 Sequence: TAAAATCTACCGGACGGTCGGT
Position: -48
Score: 5.49521 Sequence: ATCTACCGGACGGTCGGTCAAT
Locus tag: Vapar_1238
Name: paaF Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: Vapar_1237
Name: paaY Funciton: thioesterase superfamily protein
Locus tag: Vapar_1236
Name: paaK Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
Locus tag: Vapar_1235
Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: Vapar_1234
Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: Vapar_1233
Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: Vapar_1232
Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: Vapar_1231
Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: Vapar_1230
Name: livK Funciton: Putative branched-chain amino acid ABC transporter, substrate-binding component
Locus tag: Vapar_1229
Name: livH Funciton: Putative branched-chain amino acid ABC transporter, permease component
Locus tag: Vapar_1228
Name: livM Funciton: Putative branched-chain amino acid ABC transporter, ATPase component
Locus tag: Vapar_1227
Name: livF Funciton: Putative branched-chain amino acid ABC transporter, permease component 2
Locus tag: Vapar_1226
Name: paaZ Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ |
||||
| paaF-paaY-paaK-paaA-paaB-paaC-paaD-paaE-livK-livH-livM-livF-paaZ | -52 | 4.6 | TAAAATCTACCGGACGGTCGGT | Vapar_1238 |
| -48 | 5.5 | ATCTACCGGACGGTCGGTCAAT | ||