Orthologous regulated operons containing paaD gene

Properties
Regulog:	PaaR - Ralstonia
Regulator type:	Transcription factor
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Phenylacetic acid degradation
Effector:	Phenylacetyl-CoA
Phylum:	Betaproteobacteria

Built upon 18 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Cupriavidus taiwanensis
Position: -83 Score: 6.22724 Sequence: ATTGACCGACCGGTCGGCTTAT Locus tag: RALTA_A2973 Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit Locus tag: RALTA_A2974 Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit Locus tag: RALTA_A2975 Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit Locus tag: RALTA_A2976 Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit Locus tag: RALTA_A2977 Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-) Locus tag: RALTA_A2978 Name: paaW Funciton: Protein of unknown function DUF3658/DUF1835 Locus tag: RALTA_A2979 Name: paaR Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
paaA-paaB-paaC-paaD-paaE-paaW-paaR	-83	6.2	ATTGACCGACCGGTCGGCTTAT	RALTA_A2973
Ralstonia eutropha H16
Position: -79 Score: 5.73852 Sequence: ATTGACCGACCGGTCGGCATAT Locus tag: H16_A3520 Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit Locus tag: H16_A3521 Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit Locus tag: H16_A3522 Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit Locus tag: H16_A3523 Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit Locus tag: H16_A3524 Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-) Locus tag: H16_A3525 Name: paaW Funciton: Protein of unknown function DUF3658/DUF1835 Locus tag: H16_A3526 Name: paaR Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
paaA-paaB-paaC-paaD-paaE-paaW-paaR	-79	5.7	ATTGACCGACCGGTCGGCATAT	H16_A3520
Ralstonia eutropha JMP134
Position: -95 Score: 6.22724 Sequence: ATTGACCGACCGGTCGGCTTAT Locus tag: Reut_A3206 Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit Locus tag: Reut_A3207 Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit Locus tag: Reut_A3208 Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit Locus tag: Reut_A3209 Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit Locus tag: Reut_A3210 Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-) Locus tag: Reut_A3211 Name: paaW Funciton: Protein of unknown function DUF3658/DUF1835 Locus tag: Reut_A3212 Name: paaR Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
paaA-paaB-paaC-paaD-paaE-paaW-paaR	-95	6.2	ATTGACCGACCGGTCGGCTTAT	Reut_A3206
Ralstonia metallidurans CH34
Position: -113 Score: 6.76152 Sequence: ATTGACCGACCGGTCGGTTTAT Locus tag: Rmet_3369 Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit Locus tag: Rmet_3370 Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit Locus tag: Rmet_3371 Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit Locus tag: Rmet_3372 Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit Locus tag: Rmet_3373 Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-) Locus tag: Rmet_3374 Name: paaW Funciton: Protein of unknown function DUF3658/DUF1835 Locus tag: Rmet_3375 Name: paaR Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
paaA-paaB-paaC-paaD-paaE-paaW-paaR	-113	6.8	ATTGACCGACCGGTCGGTTTAT	Rmet_3369
Ralstonia pickettii 12J
Position: -96 Score: 6.34603 Sequence: ATTGACCGACCGGTCGGACGGT Locus tag: Rpic_4567 Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit Locus tag: Rpic_4566 Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit Locus tag: Rpic_4565 Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit Locus tag: Rpic_4564 Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit Locus tag: Rpic_4563 Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
paaA-paaB-paaC-paaD-paaE	-96	6.3	ATTGACCGACCGGTCGGACGGT	Rpic_4567
Ralstonia solanacearum GMI1000
Position: -97 Score: 6.30204 Sequence: ATTGACCGACCGGTCGGACGAT Locus tag: RSp0604 Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit Locus tag: RSp0605 Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit Locus tag: RSp0606 Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit Locus tag: RSp0607 Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit Locus tag: RSp0608 Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
paaA-paaB-paaC-paaD-paaE	-97	6.3	ATTGACCGACCGGTCGGACGAT	RSp0604