Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing paaF gene

Properties
Regulog: PaaR - Burkholderia
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Phenylacetic acid degradation
Effector: Phenylacetyl-CoA
Phylum: Betaproteobacteria
Built upon 27 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Burkholderia cepacia AMMD
Position: -63
Score: 6.41721
Sequence: TCCGACCAACCGGTCGGTTAAT
Locus tag: Bamb_0448
Name: paaZ
Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
Locus tag: Bamb_0447
Name: paaJ
Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Locus tag: Bamb_0446
Name: paaF
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: Bamb_0445
Name: paaY
Funciton: thioesterase superfamily protein
Locus tag: Bamb_0444
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
paaZ-paaJ-paaF-paaY-paaK -63 6.4 TCCGACCAACCGGTCGGTTAAT Bamb_0448
Burkholderia glumae BGR1
Position: -70
Score: 6.23932
Sequence: GCCGACCAACCGGTCGGTTAAT
Locus tag: bglu_1g04490
Name: paaZ
Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
Locus tag: bglu_1g04480
Name: paaF
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: bglu_1g04470
Name: paaY
Funciton: thioesterase superfamily protein
Locus tag: bglu_1g04460
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
paaZ-paaF-paaY-paaK -70 6.2 GCCGACCAACCGGTCGGTTAAT bglu_1g04490
Burkholderia mallei ATCC 23344
Position: -64
Score: 6.01431
Sequence: TCCGACTAACCGGTCGGTTAAT
Locus tag: BMAA0543
Name: paaZ
Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
Locus tag: BMAA0542
Name: paaJ
Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Locus tag: BMAA0541
Name: paaF
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: BMAA0539.1
Name: paaY
Funciton: thioesterase superfamily protein
Locus tag: BMAA0539
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
paaZ-paaJ-paaF-paaY-paaK -64 6 TCCGACTAACCGGTCGGTTAAT BMAA0543
Burkholderia phymatum STM815
Position: -68
Score: 6.55019
Sequence: ACCAACCAACCGGTCGGTCAAT
Locus tag: Bphy_2689
Name: paaZ
Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
Locus tag: Bphy_2690
Name: paaJ
Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Locus tag: Bphy_2691
Name: paaF
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: Bphy_2692
Name: paaY
Funciton: thioesterase superfamily protein
Locus tag: Bphy_2693
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
paaZ-paaJ-paaF-paaY-paaK -68 6.6 ACCAACCAACCGGTCGGTCAAT Bphy_2689
Burkholderia pseudomallei K96243
Position: -64
Score: 6.41721
Sequence: TCCGACCAACCGGTCGGTTAAT
Locus tag: BPSL3041
Name: paaZ
Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
Locus tag: BPSL3042
Name: paaJ
Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Locus tag: BPSL3043
Name: paaF
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: BPSL3044
Name: paaY
Funciton: thioesterase superfamily protein
Locus tag: BPSL3045
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
paaZ-paaJ-paaF-paaY-paaK -64 6.4 TCCGACCAACCGGTCGGTTAAT BPSL3041
Burkholderia sp. 383
Position: -63
Score: 6.41721
Sequence: TCCGACCAACCGGTCGGTTAAT
Locus tag: Bcep18194_A3630
Name: paaZ
Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
Locus tag: Bcep18194_A3629
Name: paaJ
Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Locus tag: Bcep18194_A3628
Name: paaF
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: Bcep18194_A3627
Name: paaY
Funciton: thioesterase superfamily protein
Locus tag: Bcep18194_A3626
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
paaZ-paaJ-paaF-paaY-paaK -63 6.4 TCCGACCAACCGGTCGGTTAAT Bcep18194_A3630
Burkholderia vietnamiensis G4
Position: -63
Score: 6.41721
Sequence: TCCGACCAACCGGTCGGTTAAT
Locus tag: Bcep1808_0520
Name: paaZ
Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
Locus tag: Bcep1808_0519
Name: paaJ
Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Locus tag: Bcep1808_0518
Name: paaF
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: Bcep1808_0517
Name: paaY
Funciton: thioesterase superfamily protein
Locus tag: Bcep1808_0516
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
paaZ-paaJ-paaF-paaY-paaK -63 6.4 TCCGACCAACCGGTCGGTTAAT Bcep1808_0520
Burkholderia xenovorans LB400
Position: -66
Score: 6.18713
Sequence: CCCAACCAACCGGTCGGTCAAT
Locus tag: Bxe_A0470
Name: paaZ
Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
Locus tag: Bxe_A0469
Name: paaJ
Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Locus tag: Bxe_A0468
Name: paaF
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: Bxe_A0467
Name: paaY
Funciton: thioesterase superfamily protein
Locus tag: Bxe_A0466
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
paaZ-paaJ-paaF-paaY-paaK -66 6.2 CCCAACCAACCGGTCGGTCAAT Bxe_A0470
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