Orthologous regulated operons containing paaB gene
| Regulog: | PaaR - Burkholderia |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Phenylacetic acid degradation |
| Effector: | Phenylacetyl-CoA |
| Phylum: | Betaproteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Burkholderia cepacia AMMD | ||||
|
Position: -62
Score: 7.10894 Sequence: ATTAACCGACCGGTCGGTTGGT
Locus tag: Bamb_0249
Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: Bamb_0248
Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: Bamb_0247
Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: Bamb_0246
Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: Bamb_0245
Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: Bamb_0244
Name: paaW Funciton: Protein of unknown function DUF3658/DUF1835
Locus tag: Bamb_0243
Name: paaR Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family |
||||
| paaA-paaB-paaC-paaD-paaE-paaW-paaR | -62 | 7.1 | ATTAACCGACCGGTCGGTTGGT | Bamb_0249 |
| Burkholderia glumae BGR1 | ||||
|
Position: -62
Score: 6.77945 Sequence: ATTAACCGACCGGACGGTTGGT
Locus tag: bglu_1g02410
Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: bglu_1g02400
Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: bglu_1g02390
Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: bglu_1g02380
Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: bglu_1g02370
Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: bglu_1g02360
Name: paaW Funciton: Protein of unknown function DUF3658/DUF1835
Locus tag: bglu_1g02350
Name: paaR Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family |
||||
| paaA-paaB-paaC-paaD-paaE-paaW-paaR | -62 | 6.8 | ATTAACCGACCGGACGGTTGGT | bglu_1g02410 |
| Burkholderia mallei ATCC 23344 | ||||
|
Position: -62
Score: 7.10894 Sequence: ATTAACCGACCGGTCGGTTGGT
Locus tag: BMA2573
Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: BMA2574
Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: BMA2575
Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: BMA2576
Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: BMA2577
Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: BMA2578
Name: paaW Funciton: Protein of unknown function DUF3658/DUF1835
Locus tag: BMA2579
Name: paaR Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family |
||||
| paaA-paaB-paaC-paaD-paaE-paaW-paaR | -62 | 7.1 | ATTAACCGACCGGTCGGTTGGT | BMA2573 |
| Burkholderia phymatum STM815 | ||||
|
Position: -66
Score: 6.77945 Sequence: ATTAACCGACCGGACGGTTGGT
Locus tag: Bphy_2857
Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: Bphy_2858
Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: Bphy_2859
Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: Bphy_2860
Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: Bphy_2861
Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: Bphy_2862
Name: paaW Funciton: Protein of unknown function DUF3658/DUF1835
Locus tag: Bphy_2863
Name: paaR Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family |
||||
| paaA-paaB-paaC-paaD-paaE-paaW-paaR | -66 | 6.8 | ATTAACCGACCGGACGGTTGGT | Bphy_2857 |
| Burkholderia pseudomallei K96243 | ||||
|
Position: -62
Score: 7.10894 Sequence: ATTAACCGACCGGTCGGTTGGT
Locus tag: BPSL3230
Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: BPSL3231
Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: BPSL3232
Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: BPSL3233
Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: BPSL3234
Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: BPSL3235
Name: paaW Funciton: Protein of unknown function DUF3658/DUF1835
Locus tag: BPSL3236
Name: paaR Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family |
||||
| paaA-paaB-paaC-paaD-paaE-paaW-paaR | -62 | 7.1 | ATTAACCGACCGGTCGGTTGGT | BPSL3230 |
| Burkholderia sp. 383 | ||||
|
Position: -61
Score: 7.10894 Sequence: ATTAACCGACCGGTCGGTTGGT
Locus tag: Bcep18194_A3429
Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: Bcep18194_A3428
Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: Bcep18194_A3427
Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: Bcep18194_A3426
Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: Bcep18194_A3425
Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: Bcep18194_A3424
Name: paaW Funciton: Protein of unknown function DUF3658/DUF1835
Locus tag: Bcep18194_A3423
Name: paaR Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family |
||||
| paaA-paaB-paaC-paaD-paaE-paaW-paaR | -61 | 7.1 | ATTAACCGACCGGTCGGTTGGT | Bcep18194_A3429 |
| Burkholderia vietnamiensis G4 | ||||
|
Position: -62
Score: 7.10894 Sequence: ATTAACCGACCGGTCGGTTGGT
Locus tag: Bcep1808_0312
Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: Bcep1808_0311
Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: Bcep1808_0310
Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: Bcep1808_0309
Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: Bcep1808_0308
Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: Bcep1808_0307
Name: paaW Funciton: Protein of unknown function DUF3658/DUF1835
Locus tag: Bcep1808_0306
Name: paaR Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family |
||||
| paaA-paaB-paaC-paaD-paaE-paaW-paaR | -62 | 7.1 | ATTAACCGACCGGTCGGTTGGT | Bcep1808_0312 |
| Burkholderia xenovorans LB400 | ||||
|
Position: -65
Score: 7.10894 Sequence: ATTAACCGACCGGTCGGTTGGT
Locus tag: Bxe_A0295
Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: Bxe_A0294
Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: Bxe_A0293
Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: Bxe_A0292
Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: Bxe_A0291
Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: Bxe_A0290
Name: paaW Funciton: Protein of unknown function DUF3658/DUF1835
Locus tag: Bxe_A0289
Name: paaR Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family |
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| paaA-paaB-paaC-paaD-paaE-paaW-paaR | -65 | 7.1 | ATTAACCGACCGGTCGGTTGGT | Bxe_A0295 |