Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing paaK gene

Properties
Regulog: PaaR - Actinobacteria
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Phenylacetic acid degradation
Effector: Phenylacetyl-CoA
Phylum: Actinobacteria
Built upon 85 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Arthrobacter chlorophenolicus A6
Position: -42
Score: 5.25667
Sequence: ACCTAATGAACATTCGGTAAAT
Locus tag: Achl_3047
Name: paaI
Funciton: Phenylacetic acid degradation protein PaaI, thioesterase
Locus tag: Achl_3048
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
Locus tag: Achl_3049
Name: paaR
Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
paaI-paaK-paaR -42 5.3 ACCTAATGAACATTCGGTAAAT Achl_3047
Arthrobacter sp. FB24
Position: -42
Score: 5.25667
Sequence: ACCTAATGAACATTCGGTAAAT
Locus tag: Arth_3246
Name: paaI
Funciton: Phenylacetic acid degradation protein PaaI, thioesterase
Locus tag: Arth_3247
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
paaI-paaK -42 5.3 ACCTAATGAACATTCGGTAAAT Arth_3246
Corynebacterium efficiens YS-314
Position: -176
Score: 5.43404
Sequence: ACTTACCGACTGGTCAGTTGGT
Locus tag: CE0663
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
Locus tag: CE0662
Name: paaT
Funciton: Predicted phylacetic acid transporter PaaT
paaK-paaT -176 5.4 ACTTACCGACTGGTCAGTTGGT CE0663
Kocuria rhizophila DC2201
Position: -181
Score: 4.79563
Sequence: AATAACTGACCGCTCGTTCAGA
Position: -38
Score: 4.65102
Sequence: ACTGACCGATCGTTCTGAAAAT
Locus tag: KRH_02160
Name: paaI
Funciton: Phenylacetic acid degradation protein PaaI, thioesterase
Locus tag: KRH_02170
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
Locus tag: KRH_02180
Name: paaR
Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
paaI-paaK-paaR -181 4.8 AATAACTGACCGCTCGTTCAGA KRH_02160
-38 4.7 ACTGACCGATCGTTCTGAAAAT
Mycobacterium abscessus ATCC 19977
Position: -37
Score: 6.17773
Sequence: AATAACCGAACATTCGGTCGGT
Locus tag: MAB_0906
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: MAB_0907
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: MAB_0908
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: MAB_0909
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: MAB_0910
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: MAB_0911
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
paaA-paaB-paaC-paaD-paaE-paaK -37 6.2 AATAACCGAACATTCGGTCGGT MAB_0906
Nocardia farcinica IFM 10152
Position: -49
Score: 5.81919
Sequence: ACTGACCGAATGTTCGGTAATA
Locus tag: nfa21570
Name: paaJ
Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Locus tag: nfa21580
Name: paaF
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: nfa21590
Name: paaH
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Locus tag: nfa21600
Name: paaG
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: nfa21610
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: nfa21620
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: nfa21630
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: nfa21640
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: nfa21650
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: nfa21660
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
paaJ-paaF-paaH-paaG-paaA-paaB-paaC-paaD-paaE-paaK -49 5.8 ACTGACCGAATGTTCGGTAATA nfa21570
Rhodococcus erythropolis PR4
Position: -35
Score: 5.03299
Sequence: ACCAACCGATCATTCGGTAATA
Locus tag: RER_55500
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: RER_55490
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: RER_55480
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: RER_55470
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: RER_55460
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: RER_55450
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
paaA-paaB-paaC-paaD-paaE-paaK -35 5 ACCAACCGATCATTCGGTAATA RER_55500
Rhodococcus opacus B4
Position: 23
Score: 5.03299
Sequence: ACCAACCGATCATTCGGTAATA
Locus tag: ROP_25820
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: ROP_25810
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: ROP_25800
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: ROP_25790
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: ROP_25780
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: ROP_25770
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
paaA-paaB-paaC-paaD-paaE-paaK 23 5 ACCAACCGATCATTCGGTAATA ROP_25820
Rhodococcus sp. RHA1
Position: -34
Score: 5.03299
Sequence: ACCAACCGATCATTCGGTAATA
Locus tag: RHA1_ro02859
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: RHA1_ro02858
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: RHA1_ro02857
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: RHA1_ro02856
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: RHA1_ro02855
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: RHA1_ro02854
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
paaA-paaB-paaC-paaD-paaE-paaK -34 5 ACCAACCGATCATTCGGTAATA RHA1_ro02859
Saccharomonospora viridis DSM 43017
Position: -42
Score: 5.73763
Sequence: AGTAACCGTCCATTCGGTCAGT
Locus tag: Svir_26560
Name: paaI
Funciton: Phenylacetic acid degradation protein PaaI, thioesterase
Locus tag: Svir_26570
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
Locus tag: Svir_26580
Name: paaR
Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
paaI-paaK-paaR -42 5.7 AGTAACCGTCCATTCGGTCAGT Svir_26560
Saccharopolyspora erythraea NRRL 2338
Position: -232
Score: 5.18149
Sequence: TTTTACCGACCGTTCGTTCGGT
Position: -94
Score: 5.48238
Sequence: AATAACCGACTACTCGGTCAGT
Locus tag: SACE_3542
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
Locus tag: SACE_3541
Name: paaR
Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
paaK-paaR -232 5.2 TTTTACCGACCGTTCGTTCGGT SACE_3542
-94 5.5 AATAACCGACTACTCGGTCAGT
Streptomyces avermitilis MA-4680
Position: -56
Score: 4.6858
Sequence: GGCTACCGAATGATCGGTCGCC
Locus tag: SAV_1257
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
paaK -56 4.7 GGCTACCGAATGATCGGTCGCC SAV_1257
Streptomyces coelicolor A3(2)
Position: -152
Score: 5.01265
Sequence: CCCAACCGACCATTCGTTCGGT
Position: -29
Score: 5.54906
Sequence: GCTAACCGAATGGTCGGTCGGG
Locus tag: SCO7470
Name: paaI
Funciton: Phenylacetic acid degradation protein PaaI, thioesterase
Locus tag: SCO7469
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
paaI-paaK -152 5 CCCAACCGACCATTCGTTCGGT SCO7470
-29 5.5 GCTAACCGAATGGTCGGTCGGG
Streptomyces griseus subsp. griseus NBRC 13350
Position: -77
Score: 4.96859
Sequence: ATCGACCGAATGATCGGTCGCC
Locus tag: SGR_6814
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
paaK -77 5 ATCGACCGAATGATCGGTCGCC SGR_6814
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