Regulons of Oceanicaulis alexandrii HTCC2633

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	14	17
TF	HrcA	Heat shock	Heat shock response	1	1
TF	HutC	cis-Urocanic acid	Histidine utilization	2	2
TF	IscR	Iron-sulfur cluster redox state; Iron ion, (Fe2+)	Iron-sulfur cluster biogenesis; Iron homeostasis	3	1
TF	LexA	DNA damage	SOS response	10	7
TF	LiuR		Branched-chain amino acid degradation	2	1
TF	NadQ		NAD biosynthesis	2	3
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	3	2
TF	PdxR3		Metabolite transport; Pyridoxine/pyridoxal homeostasis	1	1
TF	SahR	S-adenosylhomocysteine	Methionine metabolism	4	3
TF	SoxR	Paraquat	Superoxide stress response	2	2
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	2	1
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	1	1
RNA	Glycine	Glycine	Glycine metabolism	1	2
RNA	S15		Ribosome biogenesis	1	1
RNA	SAM_alpha	S-adenosylmethionine	Methionine biosynthesis	1	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	3	1
RNA	mini-ykkC		Multidrug resistance	1	1

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --