Profile of regulator AfrR in Rhizobiales
Properties
| Regulator family: |
LacI |
| Regulation mode: |
repressor |
| Biological process: |
1,5-Anhydro-d-Fructose utilization |
| Effector: |
|
| Regulog: |
AfrR - Rhizobiales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Brucella melitensis 16M
|
|
BMEI0018 |
PF06187 |
-223 |
5.8 |
TAATTGGAACGTTCCAAGAC |
|
BMEI0018 |
PF06187 |
-56 |
5.9 |
CATTTGGAACGTTCTAAACT |
|
BMEI0019 |
afrR |
-154 |
5.9 |
AGTTTAGAACGTTCCAAATG |
|
Mesorhizobium loti MAFF303099
|
|
mll3044 |
PF06187 |
-209 |
5.7 |
CTATTGGAACGTTCTAATCC |
|
mll3044 |
PF06187 |
-45 |
5.6 |
TTATTGGAACGTTCCATTTA |
|
mlr3045 |
afrR |
-216 |
5.6 |
TAAATGGAACGTTCCAATAA |
|
mlr3045 |
afrR |
-52 |
5.7 |
GGATTAGAACGTTCCAATAG |
|
Rhizobium etli CFN 42
|
|
RHE_CH01719 |
afrR |
-153 |
5.2 |
GATTTAAATCGTTCCAAAAG |
|
RHE_CH01719 |
afrR |
-57 |
6 |
TTTTTGGAACGTTCCAAATA |
|
Rhizobium leguminosarum bv. viciae 3841
|
|
RL1820 |
afrR |
-161 |
5.8 |
TTTTTAGATCGTTCCAAATT |
|
RL1820 |
afrR |
-56 |
6.2 |
CAATTGGAACGTTCCAAATA |
|
Rhizobium sp. NGR234
|
|
NGR_c32990 |
PF06187 |
-246 |
6.3 |
TAATTGGAACGTTCCAATTT |
|
NGR_c32990 |
PF06187 |
-49 |
6 |
AATTTGGAACGATCTAAATT |
|
NGR_c33000 |
afrR |
-254 |
6 |
AATTTAGATCGTTCCAAATT |
|
NGR_c33000 |
afrR |
-57 |
6.3 |
AAATTGGAACGTTCCAATTA |
|
Sinorhizobium meliloti 1021
|
|
SMc04402 |
PF06187 |
-260 |
6.3 |
TAATTGGAACGTTCCAATTT |
|
SMc04402 |
PF06187 |
-56 |
6 |
AATTTGGAACGATCTAAATT |
|
SMc04401 |
afrR |
-261 |
6 |
AATTTAGATCGTTCCAAATT |
|
SMc04401 |
afrR |
-57 |
6.3 |
AAATTGGAACGTTCCAATTA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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