Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator glnA in Cyanobacteria

Properties
Regulator family: RF01739
Regulation mode:
Biological process: Nitrogen assimilation
Effector: L-glutamine
Regulog: glnA - Cyanobacteria
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Cyanothece sp. ATCC 51142
cce_2638 IF17 -117 50 AATCGTTCATCCTTTCCAGCAGACATTCATCAACAATGGAGGGACGGAAGTAAGGATTTTTCCTGAAGGAACGCGCC
cce_1045 cce_1045 -95 55.5 TCGTTCATCTGTTGTCACCAACAGACGGAAGTAGGGAATCAATATCCCGAAGGAACGCGCCTC
Cyanothece sp. PCC 7425
Cyan7425_4644 IF17 -130 50.9 CATCGTTCATCTCCAACCGTGACTGACTGTCCAATTGACCTCAGTCCTGGAGACGGAAGTAGGGAGTCATCCCGAAGGAACGCGCC
Cyan7425_2387 IF17 -154 50.4 TCGTTCATCTCTCCAATTAATCCGACTTTGACAACCGGGATGGACCTCTTACAGGTGGGAGAGACGGAAGTAAGGATAATCCTGAAGGAACGCGCCTC
Cyan7425_1393 IF17 -132 49.3 GATCGTTCATCTCTCTAGCAACTTACCTCTGTACTTACCTCTGTATAGTTAGGCATCTGGAGAGACGGAAGTAGGGGTTTCCCCGAAGGAACGCGCC
Cyanothece sp. PCC 8801
PCC8801_4348 cce_1045 -103 47.2 AATCGTTCATCCGCCTATCGGTCGGACGGAAGTAGGAAGTCATTGAGAGCTTCTGAAGGAACGCGCC
Prochlorococcus marinus str. MIT 9313
PMT1479 null -137 35.2 ACGTTGAGCTAGGTCATCGCATCGTCGTTGATCCATCAGCCGGAAGTAGCCCTCCGCAAGGCGAAGCAACGCTCCTT
Synechococcus elongatus PCC 7942
Synpcc7942_2529 IF17 -94 41.6 AATCGTTGGCCCAGTTTATCTGGGTGGAAGTAAGGTCTTTGGCCTGAAGCAACGCGCC
Synechococcus sp. JA-3-3Ab
CYA_0922 IF17 -188 48.9 AATCGTTCATCCTCTCGCCTGCTGTTTGGCTTATCGTGGAGCAAGACGGCAGCCGGAGGACGGAAGTAGGGAGCTATCCCGAAGGAACGCGCC
Synechocystis sp. PCC 6803
sll1515 IF17 -96 56.2 AATCGTTCATCTTCTCTTTTTGAAGAAGACGGAAGTAGGGATATATTCCTGAAGGAACGCGCC
Thermosynechococcus elongatus BP-1
tll1670 (deprecated) IF17 -124 49.8 AATCGTTCATCTTCGCTAGAGCGCACCTGAAAACTTGGGTGAGCAGCGAAGACGGAAGTAGGGCAGTTGTCCCGAAGGAACGCGCC
tll0165 (deprecated) IF17 -97 42 CAGCGTTGTTCCTTTGCGAGGGACGGAAGTAGGGAAATAAATCCCGAAGGAACGCGCC
Trichodesmium erythraeum IMS101
Tery_3029 IF17 -86 39.7 AAGCGTTCATCTTCTCAGAAGACGGAAGTAAGGAAACATCCTGAAGGAATTTACC
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