Profile of regulator S15 in Pseudomonadaceae
Properties
| Regulator family: |
RF00114 |
| Regulation mode: |
|
| Biological process: |
Ribosome biogenesis |
| Effector: |
|
| Regulog: |
S15 - Pseudomonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Pseudomonas aeruginosa PAO1
|
|
PA4741 |
rpsO |
-65 |
50.4 |
CGGTCATTCCTCCTTTTAAAACACGGGAAGCGATTCCCGGCCTGTTCACTCAGAGGAAGCCCATCATGGCACTGAGCGTTGAAGAAAAAGCGCAGATCGTTAACGAATACAAGCAAGCTGAA |
|
Pseudomonas entomophila L48
|
|
PSEEN0798 |
rpsO |
-40 |
50.4 |
TGGACCCCGCTTGCGGGATCCGTTTATCAGGAGAAGCCTCATGGCCCTCAGCGTTGAAGAAAAAGCTCAGATCGTTGCCGAATACCAGCAAGCCGCCGG |
|
Pseudomonas putida KT2440
|
|
PP_4709 |
rpsO |
-41 |
53.6 |
ATTGGACCCCGCATGCGGGATCCGTTATCAGGAGAAGCCACATGGCCCTCAGCGTTGAAGAAAAAGCTCAGATCGTTGCCGAATATCAGCAAGCCGCC |
|
Pseudomonas syringae pv. tomato str. DC3000
|
|
PSPTO4487 |
rpsO |
-53 |
45.2 |
GCCTGTTGGAAACGTTTCCCCGGAAGCGCTTCCCTGAAATAAGGATTGCCCACATGGCACTCAGCGTTGAAGAAAAAGCTCAGATCGTAACCGACTACCAGCAAGCTGTT |
|
Pseudomonas fluorescens Pf-5
|
|
PFL_0847 |
rpsO |
-45 |
50.8 |
GTTGAAACTGTTCTTGAACAGTTTCCTGATATAAGGATTGCCCACATGGCACTCAGCGTTGAAGAAAAAGCTCAGATCGTAACCGACTACCAGCAAGCTGTTGG |
|
Pseudomonas mendocina ymp
|
|
Pmen_3605 |
rpsO |
-41 |
50.6 |
TTGAGACTGCTGCGGCAGTTTCCAGATGAGAGGAAGCCAACATGGCACTCAGCGTTGAAGAAAAAGCCCAGATCGTAAACGAGTACAAGCAAGCTGAA |
|
Pseudomonas stutzeri A1501
|
|
PST_3307 |
rpsO |
-61 |
52.7 |
GTCATGCCTCTTTATTAAACACGGGGTCAATCCCCGGCCTGTTCACTCAAGGAGCCCTACCATGGCACTGAGCGTTGAAGAAAAAGCCCAGATCGTTAACGAGTACAAGCAAGCTGAA |
|
Azotobacter vinelandii AvOP
|
|
Avin_42790 |
rpsO |
-68 |
42 |
CCCGGCCTGCTGAAGCCGTCCGACGCCGCATTGGCCCGCACGGTTTCCCGACAGAGAGGATGCCCATCATGGCACTCACCGTTGAAGAAAAAGCCCAGATCGTCAACGAGTACAAGCAAGCTGAA |
Export
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Regulatory Sites
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[ FASTA format ]
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DOWNLOAD
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