Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator yybP-ykoY in Pseudomonadaceae

Properties
Regulator family: RF00080
Regulation mode:
Biological process:
Effector:
Regulog: yybP-ykoY - Pseudomonadaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Pseudomonas aeruginosa PAO1
PA2910 COG1971 -176 58.8 GCCGGCCTTCCTTGGGGAGTAGCCTGCCGTCACCCGTTGACGGCGCGCTGGTCAACATTCTTGGCAACCTGCCATGGCCAGCGCATCCAACCGGATTGGTGAGACCAACGACATTCCT
PA4629 COG2119 -213 24 GCCCCGTCCTAGGGGAGTAGTCTCCCGCGAGCGCCGCACCGGCCTCGCCCGGCACGCGTCAACACACTTGGTCCGCAGACCATGGCGCGCGCGACCCAAGCCTGCCCAGACAGGCCAAGGGTTTGACAAGACCTATGACACGCACGA
Pseudomonas entomophila L48
PSEEN0905 COG2119 -208 36.1 CCGCTCCGTCCTAGGGGAGTAGTCTCCCGCGAGCCCCCGCTCGCCCGGTACGCGTCAACACACTTGGCCCACAGGCCATGGCGCGTGCGACCCACGATCTGCGCAGACAGGTCCAGGGTTTGACAAGACCTATGACACGCAC
Pseudomonas putida KT2440
PP0760 COG2119 -229 41.8 CCGCACCGTCCTAGGGGAGTAGTCTCCCGCGAGCACCCAGCTCGCCCGGTACGCGTCAACATACTTGGTCCACAGACCATGGCGCGTGCGACCCACCATGCACGCCTGCATGGAGAGATCCGCATAGACGGATCGAGGGTTTGACAAGACCTATGACACGCAC
Pseudomonas syringae pv. tomato str. DC3000
PSPTO3755 COG1971 -176 55.9 CGGCCCTTGTTGGGGAGTAGCCTGTTCGTGACCCCGGTCACTGAGCGTTCGTATCAACATTCTCGGCAGCATGCCGTGGTACGAACACCTTCTGGTTGGCGAGACCAACGATGCATCCAT
PSPTO1145 COG2119 -208 43.6 CCGCTCCGTCCTAGGGGAGTAGTCTCCCACGAGCGCCATGCTCGTCCGGCACGTATCAACATACTTGGTCCTCAGACCATGGTACGTGCGACCCGGAATCCGCTCAGACGGATCAGTGGTTTGACAAGACCTATGACACGAAC
Pseudomonas fluorescens Pf-5
PFL_2642 COG1971 -175 53.7 CGCGCCTCTTTGGGGAGTAGCCTGCCACCGCGCCCTGCGGTGGCGCCCGTATCAACATTCTCGGCAACCTGCCGTGGTACGGGCACCGTTTCGGTTGGTGAGACCATCGACATACCTGC
PFL_5123 COG2119 -210 44.8 GCTCCGTCCTAGGGGAGTAGTCTCCCACGAGCGCCACGCTCGTCCGGCATGCGTCAACATACTTGGTCAACAGACCATGGCGCATGCGACCCAAGAGTCCGCACAGACGGACCGCAGGGTTTGACAAGACCTATGACACGCACAC
Pseudomonas mendocina ymp
Pmen_3666 COG2119 -207 36.5 CGCCCGTCCTAGGGGAGTAGTCTCCCGCGAGCGCCCTGCTCGCCCGGCACGCGTCAACACACTTGCTCCGCAGAGCATGGCGCGTGCGACCCAAGGCCTTCATAGACAGGCCTGCGGTTTGACAAGACCTATGACACGCACAC
Pseudomonas stutzeri A1501
PST_1115 COG2119 -215 43.6 GCCGCCGTCCTTGGGGGAGTAGTCTCCGACGAGCGCCCTGCTCGTCCGGCATGCGTCAACACACTTGGTCCGCAGACCATGGCGCATGCGACCGGCCAGCCTAGCAATAGCGCATGGCCCGGTTTGACAAGACCCATGACATGTAC
Azotobacter vinelandii AvOP
Avin_41250 COG2119 -205 30.9 GCGCCGTCCTGGGGGAGTAGTCTCCCGCGAGCGACCGCTCGCCCGGCACCCGTCAACATGCTTGGCCCGCAGGCCATGGCGGGTGCGACCCCGGCCTCATGCAGGCCGCAGGGTTCGACAAGACCCATGACACGTACAC
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