Profile of regulator yybP-ykoY in Pseudomonadaceae

Properties
Regulator family:	RF00080
Regulation mode:
Biological process:
Effector:
Regulog:	yybP-ykoY - Pseudomonadaceae

Member of regulog collections

By taxonomy - Pseudomonadaceae
By RNA motif - yybP-ykoY

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Pseudomonas aeruginosa PAO1
	PA2910	COG1971	-176	58.8	GCCGGCCTTCCTTGGGGAGTAGCCTGCCGTCACCCGTTGACGGCGCGCTGGTCAACATTCTTGGCAACCTGCCATGGCCAGCGCATCCAACCGGATTGGTGAGACCAACGACATTCCT
	PA4629	COG2119	-213	24	GCCCCGTCCTAGGGGAGTAGTCTCCCGCGAGCGCCGCACCGGCCTCGCCCGGCACGCGTCAACACACTTGGTCCGCAGACCATGGCGCGCGCGACCCAAGCCTGCCCAGACAGGCCAAGGGTTTGACAAGACCTATGACACGCACGA
Pseudomonas entomophila L48
	PSEEN0905	COG2119	-208	36.1	CCGCTCCGTCCTAGGGGAGTAGTCTCCCGCGAGCCCCCGCTCGCCCGGTACGCGTCAACACACTTGGCCCACAGGCCATGGCGCGTGCGACCCACGATCTGCGCAGACAGGTCCAGGGTTTGACAAGACCTATGACACGCAC
Pseudomonas putida KT2440
	PP0760	COG2119	-229	41.8	CCGCACCGTCCTAGGGGAGTAGTCTCCCGCGAGCACCCAGCTCGCCCGGTACGCGTCAACATACTTGGTCCACAGACCATGGCGCGTGCGACCCACCATGCACGCCTGCATGGAGAGATCCGCATAGACGGATCGAGGGTTTGACAAGACCTATGACACGCAC
Pseudomonas syringae pv. tomato str. DC3000
	PSPTO3755	COG1971	-176	55.9	CGGCCCTTGTTGGGGAGTAGCCTGTTCGTGACCCCGGTCACTGAGCGTTCGTATCAACATTCTCGGCAGCATGCCGTGGTACGAACACCTTCTGGTTGGCGAGACCAACGATGCATCCAT
	PSPTO1145	COG2119	-208	43.6	CCGCTCCGTCCTAGGGGAGTAGTCTCCCACGAGCGCCATGCTCGTCCGGCACGTATCAACATACTTGGTCCTCAGACCATGGTACGTGCGACCCGGAATCCGCTCAGACGGATCAGTGGTTTGACAAGACCTATGACACGAAC
Pseudomonas fluorescens Pf-5
	PFL_2642	COG1971	-175	53.7	CGCGCCTCTTTGGGGAGTAGCCTGCCACCGCGCCCTGCGGTGGCGCCCGTATCAACATTCTCGGCAACCTGCCGTGGTACGGGCACCGTTTCGGTTGGTGAGACCATCGACATACCTGC
	PFL_5123	COG2119	-210	44.8	GCTCCGTCCTAGGGGAGTAGTCTCCCACGAGCGCCACGCTCGTCCGGCATGCGTCAACATACTTGGTCAACAGACCATGGCGCATGCGACCCAAGAGTCCGCACAGACGGACCGCAGGGTTTGACAAGACCTATGACACGCACAC
Pseudomonas mendocina ymp
	Pmen_3666	COG2119	-207	36.5	CGCCCGTCCTAGGGGAGTAGTCTCCCGCGAGCGCCCTGCTCGCCCGGCACGCGTCAACACACTTGCTCCGCAGAGCATGGCGCGTGCGACCCAAGGCCTTCATAGACAGGCCTGCGGTTTGACAAGACCTATGACACGCACAC
Pseudomonas stutzeri A1501
	PST_1115	COG2119	-215	43.6	GCCGCCGTCCTTGGGGGAGTAGTCTCCGACGAGCGCCCTGCTCGTCCGGCATGCGTCAACACACTTGGTCCGCAGACCATGGCGCATGCGACCGGCCAGCCTAGCAATAGCGCATGGCCCGGTTTGACAAGACCCATGACATGTAC
Azotobacter vinelandii AvOP
	Avin_41250	COG2119	-205	30.9	GCGCCGTCCTGGGGGAGTAGTCTCCCGCGAGCGACCGCTCGCCCGGCACCCGTCAACATGCTTGGCCCGCAGGCCATGGCGGGTGCGACCCCGGCCTCATGCAGGCCGCAGGGTTCGACAAGACCCATGACACGTACAC

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD