Profile of regulator ydaO-yuaA in Mycobacteriaceae
Properties
| Regulator family: |
RF00379 |
| Regulation mode: |
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| Biological process: |
Osmotic stress response; Cell wall metabolism |
| Effector: |
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| Regulog: |
ydaO-yuaA - Mycobacteriaceae |
Member of regulog collections
Transcription factor binding sites
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Locus Tag |
Name |
Position |
Score |
Sequence |
|
Mycobacterium tuberculosis H37Rv
|
|
Rv0867c |
rpfA |
-233 |
49.9 |
CGCCGATAGCACGCCGAACTCCATCCAGTGGGCGAGGGATTCCGACCGCGGATGGAGGCGGGGGACCCACCAGGTCCGCCGAGATCGGACCGGAGCCGCATACGGCTCCTTGGGGTGAAGCCAACGTCGTTCGCCGATGTACGACCGCGGCCGGGTGATCCTCTCCACGGCGAATCCAACCCGAACCCGACAGCTGACCTCGTAGGCGTGTACCGAGAGGAATT |
|
Mycobacterium leprae TN
|
|
ML2151 |
rpfA |
-193 |
39.5 |
AGGCGGGGACGCTAACCGTGGATAGAGGCGGGGCACCCACCCCAGTCCGCCAACGATCGGGCCGGGGCCGTGCGCGGCCTTGGGGTCAAGTCGACGCCGTTTTCCTGATGATTACGACGTCGGCGGGGCAGCCTCTCCAACCCGAATCCGACAGCTGACTTCGCAAGCGCGTATCGAGAGGAATACC |
|
Mycobacterium marinum M
|
|
MMAR_4665 |
rpfA |
-222 |
58.7 |
CCTACAACGCGCCGAGCTCCATCCGGTAGGCGGGGGATTCCGACCCACGGATGGAGGCGGGGGACCCACCAGGTCCGCCGAGATCGGACCGGGCTCTTCACGGCCCTTGGGGTGAAGCCGACGTCGTCCCACAGATGTAGTACGACGCTGGCCGGGTAACCTCTCCAACCCGAACCCGACAGCTGACCTCGCAGGCGTGTACCGAGAGGAATTAC |
|
Mycobacterium avium 104
|
|
MAV_0996 |
rpfA |
-296 |
40.6 |
CCTCCCTATCGCGCCGAGCTCCATCCAATAGGCGGGGGCAACCGAACCACATGGATGGAGACGGGGGACCCACCGGTCCACCGTGATCGGACTGGAGCCGCCCGCGGCTCCTAGGGGTGAAGCCGACGTCGTCGCTTCGACGACCACGCCGGCCGGGTGGCCTCTCCAACCCGAACCCGACAGCTGACCTCGCAGGCGCGTGACGAGAGAGGAA |
|
Mycobacterium sp. JLS
|
|
Mjls_4862 |
rpfA |
-213 |
40.7 |
GCCCGATAGCGCCGAGCTCCATCCGTCGACGCGGGGGACCACGAACCACCTGGATGGAGGCGGGGGACCCACCGGTCCACCGAAGGACCTGGGGCCGCCAGCGGCCCCTTGGGGTGAAGCCGAGACCGGGCAACCGGAATCGGCCGGGTGACCTCTCCCACCCGAACCCGACAGCTGACCTCGCGGGCGCCGACGAGAGGACCTAT |
|
Mycobacterium vanbaalenii PYR-1
|
|
Mvan_5049 |
rpfA |
-222 |
63.1 |
CACCAATTGCGCCGAGCTCCATCCATTGGTGCGCGGGGACAACGAGATACAACTTGGATGGAGGCGGGGGACCCACCGGTCCACCGAAATACAGGACCAGGAGCCGAACTCGGTTCCTTGGGGTGAAGCCGTCGCCGTTTCGACGACGCCGGCCGGGCGACCTCTCCAGCCCGAACCCGACAGCTGACCTCGCGGGCGCTTCAGAGAGGACCACA |
|
Mycobacterium flavescens PYR-GCK
|
|
Mflv_1703 |
rpfA |
-227 |
67.6 |
ACCACCGATTGCGCCGAGCTCCATCCGTCGGTGTGCGGGGACAACGAGATACAAACCCGGATGGAGGCGGGGGACCCACTGGTCCACCGAATACGACAGGACCGGGAACCGATTCGGTTCCTTGGGGTGAAGCCGTCGACGTTTCGACGATGACGGCCGGGCGACCTCTCCAGCCCGAACCCGACAGCTGACCTCGCGGGCGTTACAGAGAGGAACC |
|
Mycobacterium smegmatis str. MC2 155
|
|
MSMEG_5700 |
rpfA |
-216 |
58.6 |
CGCCGGTAGCGCCGAGCTCCATCCATCGCGCGGAGGTAACTGCGAACACCAAGGATGGAGGCGGGGGACCCAACCGGTCCACCGAATTACGGACCAGGGGCCTTTTGGCTCCTTGGGGTGAAGCCGTCGCCGTTTCGGCGTCGACGGCCGGGTGACCTCTCCCACCCGAACCCGACAGCTGACCTCGTGGGCGCATACGAGAGGACCTCG |
|
Mycobacterium abscessus ATCC 19977
|
|
MAB_0869c |
rpfA |
-217 |
54 |
CCATACCCGCGCACCGAGCTCCGTCCCTCGGGTGTGGACCGCGTCGGAAGACCAAGGGACGGAGACGGGGGACCCATCCGCCGGAGATCCACCCGATCTCCAGCACGAACCTTGATGGTTCTTGGGGTGAAGCCCGGGCAACCGGGCCGAGCGACCTCTTGCTCGAACCCGACAGCTGACCTCGCAGGTGCGTCACAGAGAGGAACA |
Export
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Regulatory Sites
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[ FASTA format ]
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