Profile of regulator ydaO-yuaA in Mycobacteriaceae

Properties
Regulator family:	RF00379
Regulation mode:
Biological process:	Osmotic stress response; Cell wall metabolism
Effector:
Regulog:	ydaO-yuaA - Mycobacteriaceae

Member of regulog collections

By taxonomy - Mycobacteriaceae
By RNA motif - ydaO-yuaA
By pathway - Osmotic stress response
By pathway - Cell wall metabolism

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Mycobacterium tuberculosis H37Rv
	Rv0867c	rpfA	-233	49.9	CGCCGATAGCACGCCGAACTCCATCCAGTGGGCGAGGGATTCCGACCGCGGATGGAGGCGGGGGACCCACCAGGTCCGCCGAGATCGGACCGGAGCCGCATACGGCTCCTTGGGGTGAAGCCAACGTCGTTCGCCGATGTACGACCGCGGCCGGGTGATCCTCTCCACGGCGAATCCAACCCGAACCCGACAGCTGACCTCGTAGGCGTGTACCGAGAGGAATT
Mycobacterium leprae TN
	ML2151	rpfA	-193	39.5	AGGCGGGGACGCTAACCGTGGATAGAGGCGGGGCACCCACCCCAGTCCGCCAACGATCGGGCCGGGGCCGTGCGCGGCCTTGGGGTCAAGTCGACGCCGTTTTCCTGATGATTACGACGTCGGCGGGGCAGCCTCTCCAACCCGAATCCGACAGCTGACTTCGCAAGCGCGTATCGAGAGGAATACC
Mycobacterium marinum M
	MMAR_4665	rpfA	-222	58.7	CCTACAACGCGCCGAGCTCCATCCGGTAGGCGGGGGATTCCGACCCACGGATGGAGGCGGGGGACCCACCAGGTCCGCCGAGATCGGACCGGGCTCTTCACGGCCCTTGGGGTGAAGCCGACGTCGTCCCACAGATGTAGTACGACGCTGGCCGGGTAACCTCTCCAACCCGAACCCGACAGCTGACCTCGCAGGCGTGTACCGAGAGGAATTAC
Mycobacterium avium 104
	MAV_0996	rpfA	-296	40.6	CCTCCCTATCGCGCCGAGCTCCATCCAATAGGCGGGGGCAACCGAACCACATGGATGGAGACGGGGGACCCACCGGTCCACCGTGATCGGACTGGAGCCGCCCGCGGCTCCTAGGGGTGAAGCCGACGTCGTCGCTTCGACGACCACGCCGGCCGGGTGGCCTCTCCAACCCGAACCCGACAGCTGACCTCGCAGGCGCGTGACGAGAGAGGAA
Mycobacterium sp. JLS
	Mjls_4862	rpfA	-213	40.7	GCCCGATAGCGCCGAGCTCCATCCGTCGACGCGGGGGACCACGAACCACCTGGATGGAGGCGGGGGACCCACCGGTCCACCGAAGGACCTGGGGCCGCCAGCGGCCCCTTGGGGTGAAGCCGAGACCGGGCAACCGGAATCGGCCGGGTGACCTCTCCCACCCGAACCCGACAGCTGACCTCGCGGGCGCCGACGAGAGGACCTAT
Mycobacterium vanbaalenii PYR-1
	Mvan_5049	rpfA	-222	63.1	CACCAATTGCGCCGAGCTCCATCCATTGGTGCGCGGGGACAACGAGATACAACTTGGATGGAGGCGGGGGACCCACCGGTCCACCGAAATACAGGACCAGGAGCCGAACTCGGTTCCTTGGGGTGAAGCCGTCGCCGTTTCGACGACGCCGGCCGGGCGACCTCTCCAGCCCGAACCCGACAGCTGACCTCGCGGGCGCTTCAGAGAGGACCACA
Mycobacterium flavescens PYR-GCK
	Mflv_1703	rpfA	-227	67.6	ACCACCGATTGCGCCGAGCTCCATCCGTCGGTGTGCGGGGACAACGAGATACAAACCCGGATGGAGGCGGGGGACCCACTGGTCCACCGAATACGACAGGACCGGGAACCGATTCGGTTCCTTGGGGTGAAGCCGTCGACGTTTCGACGATGACGGCCGGGCGACCTCTCCAGCCCGAACCCGACAGCTGACCTCGCGGGCGTTACAGAGAGGAACC
Mycobacterium smegmatis str. MC2 155
	MSMEG_5700	rpfA	-216	58.6	CGCCGGTAGCGCCGAGCTCCATCCATCGCGCGGAGGTAACTGCGAACACCAAGGATGGAGGCGGGGGACCCAACCGGTCCACCGAATTACGGACCAGGGGCCTTTTGGCTCCTTGGGGTGAAGCCGTCGCCGTTTCGGCGTCGACGGCCGGGTGACCTCTCCCACCCGAACCCGACAGCTGACCTCGTGGGCGCATACGAGAGGACCTCG
Mycobacterium abscessus ATCC 19977
	MAB_0869c	rpfA	-217	54	CCATACCCGCGCACCGAGCTCCGTCCCTCGGGTGTGGACCGCGTCGGAAGACCAAGGGACGGAGACGGGGGACCCATCCGCCGGAGATCCACCCGATCTCCAGCACGAACCTTGATGGTTCTTGGGGTGAAGCCCGGGCAACCGGGCCGAGCGACCTCTTGCTCGAACCCGACAGCTGACCTCGCAGGTGCGTCACAGAGAGGAACA

Export
	Regulatory Sites	[ FASTA format ]	DOWNLOAD