Profile of regulator S15 in Lactobacillaceae
Properties
| Regulator family: |
RF00114 |
| Regulation mode: |
|
| Biological process: |
Ribosome biogenesis |
| Effector: |
|
| Regulog: |
S15 - Lactobacillaceae |
Member of regulog collections
Transcription factor binding sites
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Locus Tag |
Name |
Position |
Score |
Sequence |
|
Oenococcus oeni PSU-1
|
|
OEOE_1283 |
rpsO |
-62 |
22.8 |
CTTTTCGCGAACCTACCTTTTACGAATCGCTCGGTAATTGGAAATTTTGAGGAGGTAAAATCATGGCTTTAACTCAAGAAGCAAAGAACCAGATTATTAAAGAATATGCTCGCCATAATGG |
|
Lactobacillus reuteri JCM 1112
|
|
LAR_0625 |
rpsO |
-75 |
15.9 |
TTCTCAGTTTAACGATCCTCACCGACGTTATACTTAGATCTTAGGCGCATTAATATTGAAAGGTGGGAAAATAGCATGGCTATTTCAAAAGAACGTAAAGATCAAATTATTAAGGAATTCGCAACTCACGAAGG |
|
Lactobacillus salivarius subsp. salivarius UCC118
|
|
LSL_0638 |
rpsO |
-75 |
14.6 |
CTTTTTACTGAGTTTGGCGGGTCACCGTCGTCTTATCTCGGATTAAGGCAACTATTATGAAAGGTGGGAAATACATTGGCTATTTCACAAGAAAAGAAAAACGAAATTATGAAGAAGTATGCTCGTCATGAAGG |
|
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
|
|
LBUL_0706 |
rpsO |
-82 |
14.1 |
GTGAACCCCGGACGTTGTCTTTACGTTTCACCTAACGGCTGACGCTGTCCGGGGCAATTTTTCAAAAGAAAGGTGCAGAAACATGGCAGTTTCAAAAGAAAGAAAGAACGAAATCATCAAGGAATACGCAACTCACGAAGG |
|
Lactobacillus johnsonii NCC 533
|
|
LJ1006 |
rpsO |
-73 |
23.2 |
ATTGACGCTGTTTTCCCGCCGCCGACGGTTAACGTTGTTAATGGCAATTATTTAAAAGAGAGGTATTTTTCTAATGGCTATTTCAAAAGAAAAGAAAGATGAATTAATCAAAGAATACGCACGTCACGATGG |
|
Lactobacillus brevis ATCC 367
|
|
LVIS_1392 |
rpsO |
-53 |
13.9 |
CACCGCCGGCTTACTCAGTTCGGGGCACTTATTTGAAAGGTGGTACTTTTACCATGGCTATTAGTCAAGCAAAGAAGAACGAAATCATCAAGCAATACGCTCGTCACGAA |
|
Lactobacillus sakei subsp. sakei 23K
|
|
LSA1066 |
rpsO |
-70 |
18.7 |
TCTGTTTAGCGACGTTCACCCGACGCTATTCGTTGTTTCGGGTAATATAACTGAAGGGTGGAAATTAGCAATGGCTATTTCACAAGCAAGAAAAAACGAAATCATCAATGAATATGCACGTCACGAA |
|
Pediococcus pentosaceus ATCC 25745
|
|
PEPE_1146 |
rpsO |
-54 |
25.6 |
ATCTGCCGACGATTTACTCAGTCTTGGGGAATTTAAAGAATGAGGTGTTTTAACATGGCAATTTCACAAGAAAAGAAAAACGAAATTATTGCAAAGTATGCTCGTCACGAA |
|
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
|
|
LEUM_1582 |
rpsO |
-65 |
17 |
TTGTTGAGCGGCTCACCATCGCTTTACGCAGTCTCTGGCGACATTTTAGAAAGGTGGATATAAATATGGCACTTACACAAGAACGTAAGAACGAAATCATCAAGGCATACGCCCGCCACGAAGG |
Export
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Regulatory Sites
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[ FASTA format ]
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