Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator Trp_leader in Shewanellaceae

Properties
Regulator family: RF00513
Regulation mode:
Biological process: Tryptophan biosynthesis
Effector:
Regulog: Trp_leader - Shewanellaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Shewanella oneidensis MR-1
SO_3019 trpE -160 44 TCATTTGGTGGTGGCACTTCCCAACTTAGCGGGTAGTGTGAAGCTCTGTGCTCATTTGAAAGTAACAGAATCAACAGAAAAGCCCGCAGAAATGCGGGCTTTTTTGTTG
Shewanella putrefaciens CN-32
Sputcn32_2403 trpE -204 42.6 TCATTTGGTGGTGGCACTTCCCAACGTAGCGGGTGGTGTGAAGCTCTGTGCTCATTTGAAAGTGACCAGAATCAACAAGAAGCCCGCAGAAATGCGGGCTTTTTTGTTA
Shewanella sp W3-18-1
Sputw3181_1605 trpE -200 42.6 CATCATTTGGTGGTGGCACTTCCCAACGTAGCGGGTGGTGTGAAGCTCTGTGCTCATTTGAAAGTGACCAGAATCAACAAGAAGCCCGCAGAAATGCGGGCTTTTTTGT
Shewanella sp ANA-3
Shewana3_1520 trpE -160 40.7 CATCATTTGGTGGTGGTACTTCCCAACTTAGCGGGTGGTGTGAAGCTCTGTGCTCATTTGAAAGTAACAGAATCAACAAAAAAGCCCGCAGAAATGCGGGCTTTTTTGT
Shewanella sp MR-4
Shewmr4_1462 trpE -160 44.8 CATCATTTGGTGGTGGCACTTCCCAACTTAGCGGGTGGTGTGAAGCTCTGTGCTCATTTGAAAGTAACAGAATCAACAAAAAAGCCCGCAGAAATGCGGGCTTTTTTGT
Shewanella sp MR-7
Shewmr7_1528 trpE -160 44.8 CATCATTTGGTGGTGGCACTTCCCAACTTAGCGGGTGGTGTGAAGCTCTGTGCTCATTTGAAAGTAACAGAATCAACAAAAAAGCCCGCAGAAATGCGGGCTTTTTTGT
Shewanella baltica OS155
Sbal_2701 trpE -205 43.2 TCATTTGGTGGTGGCACTTCCCAACTTAGCGGGTAGTGTGAAGCTCTGTGCTCATTTGAAAGTGACCAGAATCAACAAGAAGCCCGCAGAAATGCGGGCTTTTTTGTTA
Shewanella denitrificans OS217
Sden_2450 trpE -182 45.9 TTTCTTGGTGGTGGCACTTCCCAACTTAACGGGCGGTGTGATGCGTTGTGCTTAATTGACACAAGAATTATCCAAAAAGCCCGCACCTTGCGGGCTTTTTTGTTT
Shewanella frigidimarina NCIMB 400
Sfri_1429 trpE -196 33.6 ACATGGTGGTGGCACTTCCCAAATTAACGGGTGGTGTGAAGCGTTGTGCTCATTTTTAAGAGACAAGATTTTACCAAAAAGCCCGCAGAGATGTGGGCTTTCTTGT
Shewanella amazonensis SB2B
Sama_2129 trpE -149 35 ACTGGTGGTGGCACTTCCCGAATACGCGGGTGGTGTGAAGCTTGGTGTGCGTTTAACAGACACAAGATTCATCGAAAAGGCCCGCACTACGCGGGCCTTTTTGCAT
Shewanella loihica PV-4
Shew_2251 trpE -200 34.5 TCAACTGGTGGTGGCACTTCCCAACATAGCGGGTGGTGTGAATTTCTGTGCTCATGTAAAAGAGACAAGATTTAAACAAAAAGCCCGCACTCGATGCGGGCTTTTTGCATT
Shewanella pealeana ATCC 700345
Spea_1590 trpE -224 41.5 CATTAATTGGTGGTGGCACTTCCCAAATTAGCGGGTGGTGTGGAACTGTGTGCTCAGAAAACTGAGACAAGATTCAACAAGAAAGCCCGCATACACTGCGGGCTTTCTTGT
Shewanella halifaxensis HAW-EB4
Shal_1658 trpE -221 40.5 CATCAATTGGTGGTGGCACTTCCCAAATTAGCGGGTGGTGTGGAACTGTGTGCTCAGAAAACTGAGTCAAGATTCAACAAGAAAGCCCGCATACACTGCGGGCTTTCTTGT
Shewanella piezotolerans WP3
swp_1923 trpE -231 45 CATTAATTGGTGGTGGCACTTCCCAAATTAGCGGGTGGTGTGAAATTCTGTGCTCAATCAGTTTGAGACAAGATTAAACAAAAAAGCCCGCACAATTGCGGGCTTTTTTGT
Shewanella sediminis HAW-EB3
Ssed_1686 trpE -184 46.5 CATTAATTGGTGGTGGCACTTCCCAACTTAGCGGGTGGTGTGAAACTCTGTGCTCATGTAAAAGAGACAAGATTCAACAAGAAGCCCGCATAGAATGCGGGCTTTTTTGT
Shewanella woodyi ATCC 51908
Swoo_2912 trpE -179 49.4 TCAATTGGTGGTGGCACTTCCCTAACTAGCGGGTGGTGTGAAACTCTGTGCTCATGTAAAAGAGACAAGATTCAACAATAAGCCCGCATAGATTGCGGGCTTTTTTGTAC
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