Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Profile of regulator S15 in Shewanellaceae

Properties
Regulator family: RF00114
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Regulog: S15 - Shewanellaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Shewanella oneidensis MR-1
SO_1207 rpsO -56 98.6 CCTCTGGCTGAGTTAGTGATCGGCTGGAGATTATCATTTTATATTTGGAGAGACACATGTCACTAAGTACTGAAGCGAAAGCAAAAATCCTGGCTGAATTTGGCCGTGGCGCAAA
Shewanella putrefaciens CN-32
Sputcn32_2831 rpsO -58 98.2 GCCCTCTGGCTGAGTTAGTGATCGGCTAGAGATTCATACTATATATTTGGAGAGACACATGTCACTAAGTACTGAAGCGAAAGCAAAAATCCTGGCTGAATTTGGCCGCGGCGAA
Shewanella sp W3-18-1
Sputw3181_1073 rpsO -56 98.2 CCTCTGGCTGAGTTAGTGATCGGCTAGAGATTCATACTATATATTTGGAGAGACACATGTCACTAAGTACTGAAGCGAAAGCAAAAATCCTGGCTGAATTTGGCCGCGGCGAAAA
Shewanella sp ANA-3
Shewana3_1033 rpsO -56 95.8 CCTCTGGCTGAGTTAGTGATCGGCTAGAGATTCACATTTTATATTTGGAGAGACACATGTCACTAAGTACTGAAGCGAAAGCAAAGATCCTGGCTGAATTTGGCCGTGGCGCAAA
Shewanella sp MR-4
Shewmr4_1029 rpsO -56 95.8 CCTCTGGCTGAGTTAGTGATCGGCTAGAGATTCACATTTTATATTTGGAGAGACACATGTCACTAAGTACTGAAGCGAAAGCAAAGATCCTGGCTGAATTTGGCCGTGGCGCAAA
Shewanella sp MR-7
Shewmr7_1094 rpsO -56 95.8 CCTCTGGCTGAGTTAGTGATCGGCTAGAGATTCACATTTTATATTTGGAGAGACACATGTCACTAAGTACTGAAGCGAAAGCAAAGATCCTGGCTGAATTTGGCCGTGGCGCAAA
Shewanella baltica OS155
Sbal_3236 rpsO -58 96.5 GCCCTCTGGCTGAGTTAGTGATCGGCTAGAGATTCATATTATTTATTTGGAGATATACATGTCACTAAGTACTGAAGTAAAAGCAAAAATTTTGGCTGATTTTGGCCGTTGTGAA
Shewanella denitrificans OS217
Sden_1010 rpsO -57 103.1 CCTCTGGCTGAGTTAGTGATCGGCTGGAGATACATTCTATATATTTTGGAGATACACATGTCACTAAGTACTGAAGCAAAAGCAAAAATCCTAGCTGATTTCGGCCGTTGTGAAAA
Shewanella frigidimarina NCIMB 400
Sfri_0993 rpsO -56 96.2 ACTCTGGCTGAGTTAGTGATCGGCTTGAGATACATTTACTTTTTTTGGAGATACACATGTCACTAAGTGCTGAAACAAAAGCAAAAATTTTGGCTGATTTTGGTCGCTGCGAAAA
Shewanella amazonensis SB2B
Sama_0964 rpsO -56 102.3 TTCTTGGCTGAGTTAGTGATCGGCTGAGACAATTTACTGATATTTTGGAGATATTCATGTCACTAAGTACTGAAGCTAAAGCAAAAATCCTGGCTGAGTTTGGCCGTGGTGAAAA
Shewanella loihica PV-4
Shew_2824 rpsO -56 99.2 TCTCTTTGGCTGAGTTAGTGATCGGCTGAAGTTTCTATCTATTTTTGGAGAAAAAAATGTCACTAAGTAAAGAAGTAAAAGCACAAATCCTGGCTGATTTCGGTCGTGGTGAA
Shewanella pealeana ATCC 700345
Spea_3057 rpsO -61 99.6 CCCCTTTGGCTGAGTTAGTGATCGGCTAAAGATTTTTTAATGTAATATTTTGGAGATAGAAATGTCACTAAGTGTTGAAGCTAAAGCTCAAATCCTAGCTGAATTTGGTCGTTGTGAA
Shewanella halifaxensis HAW-EB4
Shal_3144 rpsO -60 100.7 CCCCTTTGGCTGAGTTAGTGATCGGCTAAAGATTTTTAATGTAATATTTTGGAGATAGAAATGTCACTAAGTGTTGAAGCTAAAGCTCAAATCCTAGCTGAATTTGGTCGTTGTGAA
Shewanella piezotolerans WP3
swp_1221 rpsO -57 102.3 ACTTTGGCTGAGTTAGTGATCGGCTAAAGATTTTTAATTATTATTTTGGAGATAGAAATGTCACTAAGTGTTGAAGCTAAAGCTAAAATCCTAGCTGAATTTGGTCGTTGTGAAAA
Shewanella sediminis HAW-EB3
Ssed_3386 rpsO -60 94.1 TCACTTTAGCTGAGTTAGTGATTGGCTAAAGCTTATTAATGCATTATTTGGAGAGACAAAATGTCACTAAATGCTGAACAAACTGCAACAATCCTGGCTGAATTCGGTCGTAGTGAA
Shewanella woodyi ATCC 51908
Swoo_3558 rpsO -61 90.6 TCGCTTTAGCTGAGTTAGTGATTGGCTAAAGATTTATTAATGCATTATTTGGAGAGACAACATGTCACTAAATGCTGAACAAACTGCATCTATCCTGGCTGAATTCGGTCGTTGTGAA
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