Profile of regulator L10_leader in Cyanobacteria
Properties
| Regulator family: |
RF00557 |
| Regulation mode: |
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| Biological process: |
Ribosome biogenesis |
| Effector: |
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| Regulog: |
L10_leader - Cyanobacteria |
Member of regulog collections
Transcription factor binding sites
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Locus Tag |
Name |
Position |
Score |
Sequence |
|
Synechococcus sp. PCC 7002
|
|
SYNPCC7002_A1027 |
rplJ |
-193 |
62.4 |
TAAATAGATTTTATTCATGCCAGAGACAGCAGGGGCGATCGCTTAATATCCTGCCGAGGTAAAACGCTACAAGACTAAACAAGTTTTTTTCCAAGTTTGCTTGGAAGAAGAGCGTGACCCTGGCATTGTCGCTGGGGTCTATTTTTTTGTCCCT |
|
Synechocystis sp. PCC 6803
|
|
sll1745 |
rplJ |
-213 |
66.5 |
ATTTATTTAACTGGCTATGCCAAAGACCGCAGGAGCAATTAGGGTTGCTTAATTAACCTGCCGAGGTTGAAGCCTGAATCAAGATTTGAGTTTGTTGGGGATTTGCTTCCTTGACAGCTTTTGATCCTCTGCTTCAGCCCCGGCGATCGCCAAGGGGCATTTTTATTGTGTGT |
|
Cyanothece sp. ATCC 51142
|
|
cce_0224 |
rplJ |
-196 |
69.2 |
AAATAAACTTTGGTTTATGCCGAAGACAGCAGGAGCAGAACTTGCTTAAATATCCTGCCGAGGTTGAAGCCTGAAGCCATAAAACCCAGAAAAATAGTAGGTTTTGCCAACTATTTTTGTGATGGGATT |
|
Cyanothece sp. PCC 8801
|
|
PCC8801_1738 |
rplJ |
-216 |
49.1 |
AATGCTTGTTTGGCTTACGCCGTAGACAGCAGGGGCAATTTGCTTAATGTCCTGCCGAGGTTGAGGCCTGATGAAAGGTAAACAATAGGGAGAAAAAGGGACTTTAGTCTGCTTTTTTGTCCTGTGT |
|
Cyanothece sp. PCC 7425
|
|
Cyan7425_4011 |
rplJ |
-200 |
61.6 |
ACACAACTGAATCAAAAAGCCGCAGACCGCAGGTGCATTTGCTTAAATATCCTGCCGAGGTTTTACACCCTAAAGCAACGAAAAGTTGAAGCTATATAGCCTTTTCAGTTGTTGCTGTAAGACCCCGCCTGCCCTGGTTGGGGTTTTTATTTTCCCGGA |
|
Microcystis aeruginosa NIES-843
|
|
MAE_43870 |
rplJ |
-215 |
43.4 |
TGAGGGACTGGCTTAAGCCAAAGACAGCAGGTGCGAAACAGCTTAAATACCCTGCCGAGGTCAAAGCGAGAAAACAGCAGCCAAAAAGACTAAAGAGAGATATTTTCTGTCTTGGTCGTGCCTGAACTGGATTCTCTCCACTCAACCCCGGCGCTACAAGGGGTTATTTTTGTGCCTGTGG |
|
Nostoc sp. PCC 7120
|
|
alr5302 |
rplJ |
-225 |
73.4 |
AAACTAAATATGCAAAGCCGGAGACAGCAGGTGCTAACAGCTTAAACACCCTGCCGAGGTAAAAGCTCTCTTACTCAATGTGACGTGAAAAATAATGCGTCGCTTTAGTAATCAGAGTCTTGAGACTAAACCCCGGCTGAGATAGTCGGGGTTTATTGTTGTACCCTG |
|
Synechococcus elongatus PCC 7942
|
|
Synpcc7942_0632 |
rplJ |
-183 |
69.6 |
TTGTAACTAAATAGCATTGCCAGAGACAGCAGGTGTTGCACCGCAACTGAAGCATCCTGCCGAGGTAGTCCCCACAGTCTTCGTACTGTTGATCTATTTCGCTCTGGCAACCGAATTTGCCGGAGCTTTTTTGTTGCAAGA |
|
Synechococcus sp. JA-3-3Ab
|
|
CYA_1782 |
rplJ |
-228 |
60.5 |
CACAGTCGAATAGCGAGCCGAAGACAGCAGGGGCCAAGGGGCTTAATGTCCTGCCGAGGTTTGAGCGGAGTGCTAAGGGATCCCGTTGTGGACTGCTAGGTTACGCTTGTCTCAATGCGTCTCGGCTATGGCTGAGGCGCATTCTCTTTGGCGGCTC |
|
Gloeobacter violaceus PCC 7421
|
|
gvip225 |
rplJ |
-160 |
65.9 |
TTCAACCGAATCCGCGACCGAAGACAGCAGGGGCCTTGACGCTTAATCAGCCTGCCGAGGTTGGCACATGGGAAGTACGCCTCCAGGCTTTTTCCCTTTGCGCCTCGCTTCGAATATCGGCGGGGCGATTTTTTTGCCCAACCCA |
|
Thermosynechococcus elongatus BP-1
|
|
tlr0297 |
rplJ |
-150 |
60 |
ACAACTCAAGACTAAAACCGAAGACCGCAGGGGTCTGGCTGAGACATAATCTTCCTGCCGAGGTTTGCGAAGTCCATCCGTTGCGATTGGGCGATCGCCCCGGCACCCTTGCTGGGGTTTTTCTTTCACTGACT |
Export
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Regulatory Sites
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[ FASTA format ]
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