Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator yybP-ykoY in Enterobacteriales

Properties
Regulator family: RF00080
Regulation mode:
Biological process:
Effector:
Regulog: yybP-ykoY - Enterobacteriales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Escherichia coli str. K-12 substr. MG1655
b3088 ykoY -212 67.8 TTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCG
b1821 COG1971 -230 68.5 CGCCCTCATTTGGGGAGTAGCCGATTTCCAGATTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGACTGAATACTTTCAGTCAGGCGAGACCATATGCACATCAAT
Salmonella typhimurium LT2
STM3224 ykoY -214 66.6 TTACGCGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGCAAAACCACATCCGGTCACCGGGCAGCCATAAAGGAATGCGTCAGCGTATTCCTTTATTGTTGTAAGTGAGACCTTGCCGAATGGCA
STM1834 COG1971 -158 59.1 GCGCCGTCAATTGGGGAGTAGCCGATTTCCAGACTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCGCGTACGGACCAGCCGCCGCTGGTCAGGCGAGACCATAGGCGCATCAAC
Citrobacter koseri ATCC BAA-895
CKO_04491 ykoY -267 56.3 TTACGTGCAAAGGGGAGTAACTTCATTGTCGGTCGATCGTCATTACGATGTGTGAAAAACCACATCCGGTCGCCGGGCAATAAGAAAGTGATGTGCCTTCATGTCTTTGATTGATGACGAAGCCGATTCGCCATCACCCGTGGAGTGAGTACATATCACTTTCTTGTTGTAAGTGAGACCTTGCCGGAAGGCG
CKO_01156 COG1971 -224 59.6 TGCGCCGTCATTTGGGGAGTAGCCGATTTCCAGACTCAGGAAATGTACGTGTCAACATACTCGTTGAAAAACGTGGCGCGTACGGACTGATATCACTCTATTTTCAGTCAGGCGAGACCATATGCACATCA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
KPN_03516 ykoY -213 66 TTACGTGCAAAGGGGAGTAACTTCCTTGCCGGTTGATCGTCATTACGATGCGTGCAATACCGCATCCGGTCGCCGGGCAATAACCAAAGCCCATCGCGATGTACTTTGGTTGTTGTAAGTGAGACCTTGCCGGAAGGCG
KPN_02337 COG1971 -255 62 CGCCCGTCGTTGGGGAGTAGCCGATTTCCTGCCCGCCAGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCACGTACGGGTTGAAGAGATTCAATCAGGCGAGACCATAGATACATCACT
Enterobacter sp. 638
Ent638_3543 ykoY -362 67.9 TTACCTGCAAAGGGGAGTAACTTCATTGCCGGTGGGTCGTCATTACGATGCGTGCAATACCGCATCCGGTCGCCGGGCAACGAAAAAGAGTCACGAACGTGATCTTTTCGTTGTAAGTGAGACCTTGCCGGAAGGCG
Ent638_2390 COG1971 -162 51.9 GCGCCGTCGTTGGGGAGTAGCCGATTTCCTGTCTAAGGAAATGTACGTGTCAACATACTCGTTGAAAAACGTGGTGCGTACGGATTACTTACTGCACATTTCTTGTGCGTAATAGTCAGGCGAGACCATAGACGCATCAAC
Erwinia amylovora ATCC 49946
EAM_0499 ykoY -192 74.2 TTCTTATGGCAAAGGGGAGTAACTTCTTCGTCAGTCAATCGTCAATACGACATCCGCATGATGTCCGGTTACTGAACAACCGACAAAGGTTGTAAGTGAGACCTTGCCGGGAGG
Yersinia pestis KIM
y2555 COG1971 -209 51.8 GCGCCGTTCATGGGGAGTAGCCGGTTTCTGTGCAATATATTCATAATATATTGGCAAGCAGAAACGCCCGTATCAACATACTCGTTTCATTTATTTGAAACGTGGTACGGGCAGCCAGGTAAGGTTGGCGAGACCATAGACACGTAGCT
Serratia proteamaculans 568
Spro_4318 ykoY -217 66.5 TGCCGTGCAAAGGGGAGTAACTTCATTGCCGGTTAATCGTCATTACGGTGCGCAAGCACCCGGTTACCGGGCAACCTGATGTCAGGGAGCACCAAGGTGCACCTTCATCAACGTTGTAAGTGAGACCTTGCCGGAAGGCG
Spro_2817 COG1971 -194 55.4 GCGCCGTCATTGGGGAGTAGCCGGTTTCTGGATAATAAAACGCCAGAAACGCCCGTATCAACATACTCGTTTTATACATTAAAACGTGGTGCGGGCAGCCAGGTAAGGTTGGCGAGACCATAGACACGTAACT
Erwinia carotovora subsp. atroseptica SCRI1043
ECA0652 ykoY -229 59.8 TCTGTCAGGCAAAGGGGAGTAACTTTTCCGCCAGCTAATCGTCATTACGATGCGTTCCGCATCCGGTTACTGGGCAACTTTGATGAAAAGCTTGATTCTTAATGAAACAGCTTCATTAACGTTGTAAGTGAGACCTTGCCGGGAGG
ECA2389 COG1971 -231 44.2 GCGCCGTCATTGGGGAGTAGCCGATTTCTGATTAATTACTATTCATAGTAACTCGTCAGAAATGCTCGTATCAACATACTCGTTCTATCTCCATATTATCGGAGCATAAAGCGTGGTGCGGGCGGCCAAGCGTGATTGGCAGGCGAGACCATAGACACGTAGCA
Edwardsiella tarda EIB202
ETAE_0441 ykoY -218 59.9 TCTGCGCAGCAAAGGGGAGTAACTTCTTATTTGCCGGTTAATCGTCATTACGGTGCGCAGCACCCGGTTACCGGGCAACCTCGCGGGCTCCCGCCCGTGGATGCGTTGTAAGTGAGACCTTGCCGGAAGG
ETAE_0016 COG2119 -215 68.2 CTTCCGTCATGGGGGAGTAGTCTGTCGGTGCGCCAGCGCCGACGCTGACGTCAACAAACTTGGTGTTATCACCATGGCGTCAGCGCCCGTCACGAGATGGGTTGACGAGACCTGTGGCCGGCCAAG
Proteus mirabilis HI4320
PMI1608 COG1971 -198 51.5 ATCAAGTCATTGGGGAGTAGCCTGTCTTAAAATAAATCTCATTATTTTAAGAAGTCTGTATCAACATACTCGCTTATTTTTATTTAGCGTGGTACAGACGCCATTATTTGGTTGGCAAGACCATAGACACATAATT
Photorhabdus luminescens subsp. laumondii TTO1
plu3992 ykoY -241 67.2 TCACCGCAGCAAAGGGGAGTAACTTCCTTAGCCGGTTTATCGTCATTACGATGCAACAGCATCCGGTAGCCGGGCAACCTTGAACTTATACCTGATGGTACATTTTCTGTGTTGTAAGTGAGACCTTGCCAGAAGG
plu2701 COG1971 -266 27.7 TAAATTGTCATGGGGAGTAGCCTGTTTCAGAGAAACGATTTAGTTAATTTTTCTGAAAAGCCCGTATCAACACGCTCGTTACAAAATAAACGTGGTGCGGGTAACCTTATTGCTATCTTAACAGGCATTATTGTTGCTAAAAATAGCAAATGAAATAGTCTAATGAGATAGCTATTAATTCGGTTGGCAAGACCATTGCATATAGCAC
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