Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog yybP-ykoY - Enterobacteriales

Properties
Regulator type: RNA regulatory element
Name: yybP-ykoY
RFAM: RF00080
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Escherichia coli str. K-12 substr. MG1655 2 2
Salmonella typhimurium LT2 2 2
Citrobacter koseri ATCC BAA-895 2 2
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 2 2
Enterobacter sp. 638 2 2
Erwinia amylovora ATCC 49946 1 1
Yersinia pestis KIM 1 1
Serratia proteamaculans 568 2 2
Erwinia carotovora subsp. atroseptica SCRI1043 2 2
Edwardsiella tarda EIB202 2 2
Proteus mirabilis HI4320 1 1
Photorhabdus luminescens subsp. laumondii TTO1 2 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
ykoY
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -212
score = 67.83
sequence = TTACCTGCAAAGGGG...

Gene: b3088: Membrane protein TerC, possibly involved in tellurium resistance
*
Salmonella typhimurium LT2

Site:
position = -214
score = 66.59
sequence = TTACGCGCAAAGGGG...

Gene: STM3224: Membrane protein TerC, possibly involved in tellurium resistance
*
Citrobacter koseri ATCC BAA-895

Site:
position = -267
score = 56.34
sequence = TTACGTGCAAAGGGG...

Gene: CKO_04491: Membrane protein TerC, possibly involved in tellurium resistance
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -213
score = 66.04
sequence = TTACGTGCAAAGGGG...

Gene: KPN_03516: Membrane protein TerC, possibly involved in tellurium resistance
*
Enterobacter sp. 638

Site:
position = -362
score = 67.93
sequence = TTACCTGCAAAGGGG...

Gene: Ent638_3543: Membrane protein TerC, possibly involved in tellurium resistance
*
Erwinia amylovora ATCC 49946

Site:
position = -192
score = 74.18
sequence = TTCTTATGGCAAAGG...

Gene: EAM_0499: Membrane protein TerC, possibly involved in tellurium resistance
 
Yersinia pestis KIM
*
Serratia proteamaculans 568

Site:
position = -217
score = 66.46
sequence = TGCCGTGCAAAGGGG...

Gene: Spro_4318: Membrane protein TerC, possibly involved in tellurium resistance
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -229
score = 59.76
sequence = TCTGTCAGGCAAAGG...

Gene: ECA0652: Membrane protein TerC, possibly involved in tellurium resistance
*
Edwardsiella tarda EIB202

Site:
position = -218
score = 59.91
sequence = TCTGCGCAGCAAAGG...

Gene: ETAE_0441: Membrane protein TerC, possibly involved in tellurium resistance
 
Proteus mirabilis HI4320
*
Photorhabdus luminescens subsp. laumondii TTO1

Site:
position = -241
score = 67.15
sequence = TCACCGCAGCAAAGG...

Gene: plu3992: Membrane protein TerC, possibly involved in tellurium resistance
Membrane protein TerC, possibly involved in tellurium resistance
 
CRON 2.
COG1971
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -230
score = 68.5
sequence = CGCCCTCATTTGGGG...

Gene: b1821: Putative membrane protein, COG1971
*
Salmonella typhimurium LT2

Site:
position = -158
score = 59.12
sequence = GCGCCGTCAATTGGG...

Gene: STM1834: Putative membrane protein, COG1971
*
Citrobacter koseri ATCC BAA-895

Site:
position = -224
score = 59.57
sequence = TGCGCCGTCATTTGG...

Gene: CKO_01156: Putative membrane protein, COG1971
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -255
score = 62.01
sequence = CGCCCGTCGTTGGGG...

Gene: KPN_02337: Putative membrane protein, COG1971
*
Enterobacter sp. 638

Site:
position = -162
score = 51.9
sequence = GCGCCGTCGTTGGGG...

Gene: Ent638_2390: Putative membrane protein, COG1971
 
Erwinia amylovora ATCC 49946

Gene: EAM_3371: Putative membrane protein, COG1971
*
Yersinia pestis KIM

Site:
position = -209
score = 51.83
sequence = GCGCCGTTCATGGGG...

Gene: y2555: Putative membrane protein, COG1971
*
Serratia proteamaculans 568

Site:
position = -194
score = 55.43
sequence = GCGCCGTCATTGGGG...

Gene: Spro_2817: Putative membrane protein, COG1971
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -231
score = 44.25
sequence = GCGCCGTCATTGGGG...

Gene: ECA2389: Putative membrane protein, COG1971
 
Edwardsiella tarda EIB202
*
Proteus mirabilis HI4320

Site:
position = -198
score = 51.55
sequence = ATCAAGTCATTGGGG...

Gene: PMI1608: Putative membrane protein, COG1971
*
Photorhabdus luminescens subsp. laumondii TTO1

Site:
position = -266
score = 27.66
sequence = TAAATTGTCATGGGG...

Gene: plu2701: Putative membrane protein, COG1971
Putative membrane protein, COG1971
 
CRON 3.
COG2119
 
Escherichia coli str. K-12 substr. MG1655
 
Salmonella typhimurium LT2
 
Citrobacter koseri ATCC BAA-895
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
 
Enterobacter sp. 638
 
Erwinia amylovora ATCC 49946
 
Yersinia pestis KIM
 
Serratia proteamaculans 568
 
Erwinia carotovora subsp. atroseptica SCRI1043
*
Edwardsiella tarda EIB202

Site:
position = -215
score = 68.2
sequence = CTTCCGTCATGGGGG...

Gene: ETAE_0016: Predicted membrane protein, COG2119
 
Proteus mirabilis HI4320
 
Photorhabdus luminescens subsp. laumondii TTO1
Predicted membrane protein, COG2119
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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