Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing COG1971 gene

Properties
Regulator type: RNA regulatory element
Name: yybP-ykoY
RFAM: RF00080
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -224
Score: 59.57
Sequence: TGCGCCGTCATTTGG...
Locus tag: CKO_01156
Name: COG1971
Funciton: Putative membrane protein, COG1971
COG1971 -224 59.6 TGCGCCGTCATTTGG... CKO_01156
Enterobacter sp. 638
Position: -162
Score: 51.9
Sequence: GCGCCGTCGTTGGGG...
Locus tag: Ent638_2390
Name: COG1971
Funciton: Putative membrane protein, COG1971
COG1971 -162 51.9 GCGCCGTCGTTGGGG... Ent638_2390
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -231
Score: 44.25
Sequence: GCGCCGTCATTGGGG...
Locus tag: ECA2389
Name: COG1971
Funciton: Putative membrane protein, COG1971
COG1971 -231 44.2 GCGCCGTCATTGGGG... ECA2389
Escherichia coli str. K-12 substr. MG1655
Position: -230
Score: 68.5
Sequence: CGCCCTCATTTGGGG...
Locus tag: b1821
Name: COG1971
Funciton: Putative membrane protein, COG1971
COG1971 -230 68.5 CGCCCTCATTTGGGG... b1821
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -255
Score: 62.01
Sequence: CGCCCGTCGTTGGGG...
Locus tag: KPN_02337
Name: COG1971
Funciton: Putative membrane protein, COG1971
COG1971 -255 62 CGCCCGTCGTTGGGG... KPN_02337
Photorhabdus luminescens subsp. laumondii TTO1
Position: -266
Score: 27.66
Sequence: TAAATTGTCATGGGG...
Locus tag: plu2701
Name: COG1971
Funciton: Putative membrane protein, COG1971
COG1971 -266 27.7 TAAATTGTCATGGGG... plu2701
Proteus mirabilis HI4320
Position: -198
Score: 51.55
Sequence: ATCAAGTCATTGGGG...
Locus tag: PMI1608
Name: COG1971
Funciton: Putative membrane protein, COG1971
COG1971 -198 51.5 ATCAAGTCATTGGGG... PMI1608
Salmonella typhimurium LT2
Position: -158
Score: 59.12
Sequence: GCGCCGTCAATTGGG...
Locus tag: STM1834
Name: COG1971
Funciton: Putative membrane protein, COG1971
COG1971 -158 59.1 GCGCCGTCAATTGGG... STM1834
Serratia proteamaculans 568
Position: -194
Score: 55.43
Sequence: GCGCCGTCATTGGGG...
Locus tag: Spro_2817
Name: COG1971
Funciton: Putative membrane protein, COG1971
COG1971 -194 55.4 GCGCCGTCATTGGGG... Spro_2817
Yersinia pestis KIM
Position: -209
Score: 51.83
Sequence: GCGCCGTTCATGGGG...
Locus tag: y2555
Name: COG1971
Funciton: Putative membrane protein, COG1971
COG1971 -209 51.8 GCGCCGTTCATGGGG... y2555