Profile of regulator GEMM_RNA_motif in Cyanobacteria
Properties
| Regulator family: |
RF01051 |
| Regulation mode: |
|
| Biological process: |
Second messenger response |
| Effector: |
Cyclic diguanylate |
| Regulog: |
GEMM_RNA_motif - Cyanobacteria |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Cyanothece sp. PCC 7425
|
|
Cyan7425_5453 |
null |
-340 |
33.3 |
AGTCCCGAAAAGGCAACTTACTCCGAAAGGGTAAGGCGCAAATTGGTAATCCTGTAGCCAAGGTGCCGGTATGGATGTGCCAATGCCGAA |
|
Cyan7425_0305 |
null |
-340 |
36.1 |
AGTCCCGAAAAGGCAACTTGCTCCGAAAGGGTAAGACGCAAATTGGTAATCCTGTAGCCAGGGTGTCGGTATGGATGTGTCAATGCCGAA |
|
Cyan7425_5459 |
null |
-301 |
32.8 |
AGTCCCGAAAAAGCAACTTACTCCGAAAGGGTAGGGCGCAAATTGGTAAGCCTGCAGCCAGGGTATCGGTATGGCTGTGCCAATGCCGAA |
|
Cyan7425_0032 |
null |
-431 |
35.8 |
TCCCGAAAAGGCAACTTGCTCCGAAAGGGTAAGACGCAAATTGGTAATCCTGCAGCCAGGGTGTCGGTATGGATGTGTCAATGCCGAAGG |
|
Cyan7425_2124 |
null |
-199 |
36 |
TCCCGAAAAGGCAACTTGTTCCGAAAGGACAAGACGCAAATTAGGAGTCCTGTAGCCAACCTTTGATTGCGGTATGGACAGCACTAATGCCGAAGG |
|
Thermosynechococcus elongatus BP-1
|
|
tlr0560 |
null |
-287 |
33.7 |
CCCGATAAAGGTAAGTTACGCCGAAAGGGTAACGCACAAATCAAGGATCCTGTAGCCGCCGCTTCAGAAAAGGGTATGGACGTCCTTGATGCCGAAGG |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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