Profile of regulator GEMM_RNA_motif in Bacillales

Properties
Regulator family:	RF01051
Regulation mode:
Biological process:	Second messenger response
Effector:	Cyclic diguanylate
Regulog:	GEMM_RNA_motif - Bacillales

Member of regulog collections

By taxonomy - Bacillales
By RNA motif - GEMM_RNA_motif
By effector - Cyclic diguanylate
By pathway - Second messenger response

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Bacillus pumilus SAFR-032
	BPUM_0319	srfAA	-232	66.4	GAAGAAAAAGGCAAATCTATGGAAACGTAGAGACGCAAAGCCATGTCCTAAGGTAAATGTTGCTTTTTTACTATGGTCGCCAGGTTACCGAATC
Bacillus licheniformis DSM 13
	BLi00401	srfAA	-269	69.6	GCAGATAAAGGCAAACCTGCGGAAACGCAGGGACGCAAAGCCATGGCCTAAGGTGCTGACGGTGCTACGGTTGACAGGTTGCCGAATA
Anoxybacillus flavithermus WK1
	Aflv_1600	null	-65	63.1	TAAGAAGTAAAGGCACAGCTAAGGAAACTTAGCGTCGCAAAGCTATAGGGGCTAACGGGATACCTATGCCAGCCAGCTGCCATT
	Aflv_0339	tlpA	-190	68	TGAATAATCGGCAAACTACTCGAAAGGGTAGGGCGCAAAGCTATAGGGGCTACGTCTATTTGTAGATATGCCAGCCAGTTGCCCTTCT
Bacillus cereus ATCC 14579
	BC1060	null	-151	52	GATATTTTTAGCACACTATTCGAAAGGATAGGCCGCAAAGCTTAGAGTCTACGGTAATACATATTGGTTACTAAGATCGTCTGGTTGCACATTT
	BC0422	tlpA	-218	61	AGCGAGAAAGGCAAACTGATGGAAACATGAGGACGCAAAACTACAGGAGCTAAGGTCGAAAGGCTACGCTAGCCAGTTACCGGACG
Bacillus halodurans C-125
	BH0563	BH0563	-202	46	CTTGAAAAAGGCGAGTGTTTGAAATGGAAAGACGCAAAGCTGCGAGTCTGAAATCCTTCTGAATAGGGATAGTCGAGTTGTCAAAAA
Oceanobacillus iheyensis HTE831
	OB2524	sinR	-315	72.7	CCTCAGAAAAAGGCAAACCTATTGAAAGATGGGGACGCAAAGTCACAGATCTAAGGTATTTTTACTAAGATGGCTGGACTATCTGG
Paenibacillus sp. JDR-2
	Pjdr2_3934	tlpA	-181	74.4	AAACTGAAAAAGGCAAACTTGCCGAAAGGCAAGGACGCAAAGTTATGGGCCTAATGCTGCATAGAAGCGATGGCTGCCAGACCGCCGGA

Export
	Regulatory Sites	[ FASTA format ]	DOWNLOAD