Profile of regulator GEMM_RNA_motif in Bacillales
Properties
| Regulator family: |
RF01051 |
| Regulation mode: |
|
| Biological process: |
Second messenger response |
| Effector: |
Cyclic diguanylate |
| Regulog: |
GEMM_RNA_motif - Bacillales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Bacillus pumilus SAFR-032
|
|
BPUM_0319 |
srfAA |
-232 |
66.4 |
GAAGAAAAAGGCAAATCTATGGAAACGTAGAGACGCAAAGCCATGTCCTAAGGTAAATGTTGCTTTTTTACTATGGTCGCCAGGTTACCGAATC |
|
Bacillus licheniformis DSM 13
|
|
BLi00401 |
srfAA |
-269 |
69.6 |
GCAGATAAAGGCAAACCTGCGGAAACGCAGGGACGCAAAGCCATGGCCTAAGGTGCTGACGGTGCTACGGTTGACAGGTTGCCGAATA |
|
Anoxybacillus flavithermus WK1
|
|
Aflv_1600 |
null |
-65 |
63.1 |
TAAGAAGTAAAGGCACAGCTAAGGAAACTTAGCGTCGCAAAGCTATAGGGGCTAACGGGATACCTATGCCAGCCAGCTGCCATT |
|
Aflv_0339 |
tlpA |
-190 |
68 |
TGAATAATCGGCAAACTACTCGAAAGGGTAGGGCGCAAAGCTATAGGGGCTACGTCTATTTGTAGATATGCCAGCCAGTTGCCCTTCT |
|
Bacillus cereus ATCC 14579
|
|
BC1060 |
null |
-151 |
52 |
GATATTTTTAGCACACTATTCGAAAGGATAGGCCGCAAAGCTTAGAGTCTACGGTAATACATATTGGTTACTAAGATCGTCTGGTTGCACATTT |
|
BC0422 |
tlpA |
-218 |
61 |
AGCGAGAAAGGCAAACTGATGGAAACATGAGGACGCAAAACTACAGGAGCTAAGGTCGAAAGGCTACGCTAGCCAGTTACCGGACG |
|
Bacillus halodurans C-125
|
|
BH0563 |
BH0563 |
-202 |
46 |
CTTGAAAAAGGCGAGTGTTTGAAATGGAAAGACGCAAAGCTGCGAGTCTGAAATCCTTCTGAATAGGGATAGTCGAGTTGTCAAAAA |
|
Oceanobacillus iheyensis HTE831
|
|
OB2524 |
sinR |
-315 |
72.7 |
CCTCAGAAAAAGGCAAACCTATTGAAAGATGGGGACGCAAAGTCACAGATCTAAGGTATTTTTACTAAGATGGCTGGACTATCTGG |
|
Paenibacillus sp. JDR-2
|
|
Pjdr2_3934 |
tlpA |
-181 |
74.4 |
AAACTGAAAAAGGCAAACTTGCCGAAAGGCAAGGACGCAAAGTTATGGGCCTAATGCTGCATAGAAGCGATGGCTGCCAGACCGCCGGA |
Export
|
Regulatory Sites
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[ FASTA format ]
|
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