Profile of regulator HexR in Burkholderia
| Regulator family: | RpiR |
| Regulation mode: | repressor (activator) |
| Biological process: | Central carbohydrate metabolism |
| Effector: | 2-keto-3-deoxy-6-phosphogluconate |
| Regulog: | HexR - Burkholderia |
Member of regulog collections
- By trascription factor - HexR
- By taxonomy - Burkholderia
- By TF family - RpiR
- By effector - 2-keto-3-deoxy-6-phosphogluconate
- By pathway - Central carbohydrate metabolism
Transcription factor binding sites
| Locus Tag | Name | Position | Score | Sequence | |
|---|---|---|---|---|---|
| Burkholderia pseudomallei K96243 | |||||
| BPSL2933 | hexR | -69 | 6 | TTGTAGATTTTCTACAA | |
| BPSL2933 | hexR | -212 | 5.5 | TAGTAGAAAAACTACAT | |
| BPSL2932 | edd | -245 | 6 | TTGTAGAAAATCTACAA | |
| BPSL2932 | edd | -102 | 5.5 | ATGTAGTTTTTCTACTA | |
| BPSL2612 | zwf | -85 | 5.7 | TTGTAGTTAAACTACAA | |
| Burkholderia mallei ATCC 23344 | |||||
| BMA2447 | hexR | -69 | 6 | TTGTAGATTTTCTACAA | |
| BMA2447 | hexR | -212 | 5.5 | TAGTAGAAAAACTACAT | |
| BMA2446 | edd | -245 | 6 | TTGTAGAAAATCTACAA | |
| BMA2446 | edd | -102 | 5.5 | ATGTAGTTTTTCTACTA | |
| BMA2130 | zwf | -85 | 5.7 | TTGTAGTTAAACTACAA | |
| Burkholderia sp. 383 | |||||
| Bcep18194_A3745 | hexR | -200 | 5.5 | TAGTAGAAAAACTACAT | |
| Bcep18194_A3745 | hexR | -68 | 6 | TTGTAGATTTTCTACAA | |
| Bcep18194_A3746 | edd | -231 | 6 | TTGTAGAAAATCTACAA | |
| Bcep18194_A3746 | edd | -99 | 5.5 | ATGTAGTTTTTCTACTA | |
| Bcep18194_A4070 | zwf | -84 | 5.7 | TTGTAGTTAAACTACAA | |
| Burkholderia cepacia AMMD | |||||
| Bamb_0554 | hexR | -210 | 5.5 | TAGTAGAAAAACTACAT | |
| Bamb_0554 | hexR | -67 | 5.8 | ATGTAGATTTTCTACAA | |
| Bamb_0555 | edd | -242 | 5.8 | TTGTAGAAAATCTACAT | |
| Bamb_0555 | edd | -99 | 5.5 | ATGTAGTTTTTCTACTA | |
| Bamb_0827 | zwf | -83 | 5.7 | TTGTAGTTAAACTACAA | |
| Burkholderia vietnamiensis G4 | |||||
| Bcep1808_0627 | hexR | -69 | 5.8 | ATGTAGATTTTCTACAA | |
| Bcep1808_0627 | hexR | -212 | 5.7 | TAGTAGAAAAACTACAA | |
| Bcep1808_0628 | edd | -243 | 5.8 | TTGTAGAAAATCTACAT | |
| Bcep1808_0628 | edd | -100 | 5.7 | TTGTAGTTTTTCTACTA | |
| Bcep1808_0883 | zwf | -83 | 5.7 | TTGTAGTTAAACTACAA | |
| Burkholderia glumae BGR1 | |||||
| bglu_1g05510 | hexR | -205 | 5.5 | TAGTAGAAAAACTACAT | |
| bglu_1g05510 | hexR | -63 | 5.3 | CTGTAGTTTTTCTACAA | |
| bglu_1g05520 | edd | -243 | 5.3 | TTGTAGAAAAACTACAG | |
| bglu_1g05520 | edd | -101 | 5.5 | ATGTAGTTTTTCTACTA | |
| bglu_1g08060 | zwf | -132 | 5.7 | TTGTAGTTAAACTACAA | |
| Burkholderia xenovorans LB400 | |||||
| Bxe_A0588 | hexR | -226 | 5.5 | TAGTAGAAAAACTACAT | |
| Bxe_A0589 | edd | -105 | 5.5 | ATGTAGTTTTTCTACTA | |
| Bxe_A3452 | zwf | -99 | 5.7 | TTGTAGTTAAACTACAA | |
| Burkholderia phymatum STM815 | |||||
| Bphy_2581 | hexR | -74 | 4.8 | ATGTAGTTTTTGTACTT | |
| Bphy_2581 | hexR | -207 | 5.2 | TAGTAGAAAAACTACAC | |
| Bphy_2580 | edd | -242 | 4.8 | AAGTACAAAAACTACAT | |
| Bphy_2580 | edd | -109 | 5.2 | GTGTAGTTTTTCTACTA | |
| Bphy_0627 | zwf | -87 | 5.7 | TTGTAGTTAAACTACAA | |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |