Regulon of NreC in Staphylococcus epidermidis ATCC 12228
| Regulator type: | Transcription factor |
| TF locus tag: | SE1969 |
| Regulator family: | OmpR |
| Regulation mode: | activator |
| Biological process: | Nitrate and nitrite respiration |
| Effector: | NreB, sensor histidine kinase (Nitrate, Nitrite) |
| Regulog: | NreC - Staphylococcaceae |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By TF family - OmpR
- By effector - NreB, sensor histidine kinase (Nitrate, Nitrite)
- By pathway - Nitrate and nitrite respiration
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -165
Score: 5 Sequence: ATCAGGGTATGTCCTTAT
Locus tag: SE1968
Name: narK Funciton: nitrate-nitrite antiporter |
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narK
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nitrate-nitrite antiporter
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Position: -113
Score: 5.9 Sequence: ATTAGGACATTCCCTAAT
Locus tag: SE1975
Name: narG Funciton: respiratory nitrate reductase alpha chain
Locus tag: SE1974
Name: narH Funciton: respiratory nitrate reductase beta chain
Locus tag: SE1973
Name: narJ Funciton: respiratory nitrate reductase molybdenum cofactor assembly chaperone
Locus tag: SE1972
Name: narI Funciton: respiratory nitrate reductase gamma chain
Locus tag: SE1971
Name: nreA Funciton: nitrate reduction control protein, certain function is unclear
Locus tag: SE1970
Name: nreB Funciton: nitrate respiration regulation two-component system, sensor histidine kinase
Locus tag: SE1969
Name: nreC Funciton: nitrate respiration regulation two-component system, response regulator |
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narG
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respiratory nitrate reductase alpha chain
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narH
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respiratory nitrate reductase beta chain
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narJ
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respiratory nitrate reductase molybdenum cofactor assembly chaperone
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narI
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respiratory nitrate reductase gamma chain
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nreA
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nitrate reduction control protein, certain function is unclear
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nreB
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nitrate respiration regulation two-component system, sensor histidine kinase
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nreC
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nitrate respiration regulation two-component system, response regulator
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Position: -174
Score: 5.8 Sequence: ATTAGGGAAATCCCCGAT
Locus tag: SE1978
Name: nasD Funciton: assimilatory nitrite reductase, large subunit
Locus tag: SE1977
Name: nasE Funciton: assimilatory nitrite reductase, small subunit
Locus tag: SE1976
Name: nasF Funciton: uroporphyrin-III C-methyltransferase |
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nasD
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assimilatory nitrite reductase, large subunit
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nasE
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assimilatory nitrite reductase, small subunit
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nasF
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uroporphyrin-III C-methyltransferase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |