Regulon of CcpA in Macrococcus caseolyticus JCSC5402

Properties
Regulator type:	Transcription factor
TF locus tag:	MCCL_1413
Regulator family:	LacI
Regulation mode:	repressor (activator)
Biological process:	Carbon catabolism
Effector:	HPr, phosphocarrier protein; Fructose-1,6-diphosphate
Regulog:	CcpA - Staphylococcaceae
Statistics of regulated genes:
- Genes	49
- Operons	24
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 391 sites [see more]

Member of regulog collections

By taxonomy - Staphylococcaceae
By trascription factor - CcpA
By TF family - LacI
By effector - HPr, phosphocarrier protein
By effector - Fructose-1,6-diphosphate
By pathway - Carbon catabolism

Regulated operons
	Locus Tag	Name	Function
Position: -25 Score: 4.1 Sequence: AATAAAACGTTTTCAG Locus tag: MCCL_1413 Name: ccpA Funciton: catabolite control protein A
	MCCL_1413	ccpA	catabolite control protein A
Position: 0 Score: 4.7 Sequence: ATGAAAACGATTACAC Locus tag: MCCL_1409 Name: acsA Funciton: acetyl-CoA synthetase
	MCCL_1409	acsA	acetyl-CoA synthetase
Position: -49 Score: 4.4 Sequence: TTGAAAACCCTTTCAG Locus tag: MCCL_1938 Name: treP Funciton: phosphotransferase system trehalose-specific enzyme IIBC component homolog Locus tag: MCCL_1937 Name: treA Funciton: trehalose-6-phosphate hydrolase Locus tag: MCCL_1936 Name: treR Funciton: trehalose-6-phosphate-responsive transcriptional regulator
	MCCL_1938	treP	phosphotransferase system trehalose-specific enzyme IIBC component homolog
	MCCL_1937	treA	trehalose-6-phosphate hydrolase
	MCCL_1936	treR	trehalose-6-phosphate-responsive transcriptional regulator
Position: -85 Score: 4.5 Sequence: ATGTAATCGGTTTCTT Locus tag: MCCL_1319 Name: sdhC Funciton: succinate dehydrogenase cytochrome b subunit Locus tag: MCCL_1318 Name: sdhA Funciton: succinate dehydrogenase flavoprotein subunit Locus tag: MCCL_1317 Name: sdhB Funciton: succinate dehydrogenase iron-sulfur protein subunit
	MCCL_1319	sdhC	succinate dehydrogenase cytochrome b subunit
	MCCL_1318	sdhA	succinate dehydrogenase flavoprotein subunit
	MCCL_1317	sdhB	succinate dehydrogenase iron-sulfur protein subunit
Position: -103 Score: 4.3 Sequence: GTGAAAACGTTTTCGT Locus tag: MCCL_0079 Name: SA2109 Funciton: probable amino-acid or metabolite transporter
	MCCL_0079	SA2109	probable amino-acid or metabolite transporter
Position: -94 Score: 4.3 Sequence: ATGTAAGCGTTTCTAA Locus tag: MCCL_1856 Name: SA0511 Funciton: uncharacterized epimerase/dehydratase
	MCCL_1856	SA0511	uncharacterized epimerase/dehydratase
Position: -44 Score: 4.7 Sequence: ATGTAAGGGTTTTCTA Locus tag: MCCL_0582 Name: rocA Funciton: 1-pyrroline-5-carboxylate dehydrogenase Locus tag: MCCL_0583 Name: rocD Funciton: ornithine aminotransferase
	MCCL_0582	rocA	1-pyrroline-5-carboxylate dehydrogenase
	MCCL_0583	rocD	ornithine aminotransferase
Position: -65 Score: 4.8 Sequence: TTGTAATCGATTTCAT Position: -34 Score: 4.5 Sequence: ATGTAATCGGTTACAC Locus tag: MCCL_0348 Name: rbsR2 Funciton: transcriptional repressor of ribose operon Locus tag: MCCL_0349 Name: rbsK Funciton: ribokinase
	MCCL_0348	rbsR2	transcriptional repressor of ribose operon
	MCCL_0349	rbsK	ribokinase
Position: -94 Score: 4.9 Sequence: ATGAAAACGCTTAAAT Locus tag: MCCL_1639 Name: putP Funciton: high affinity proline permease
	MCCL_1639	putP	high affinity proline permease
Position: -52 Score: 4.9 Sequence: TTTAAAGCGTTTTCAT Locus tag: MCCL_1451 Name: putA Funciton: proline dehydrogenase
	MCCL_1451	putA	proline dehydrogenase
Position: -94 Score: 4.8 Sequence: TTTTAAACGTTTACAT Locus tag: MCCL_0434 Name: pflB Funciton: Pyruvate formate lyase Locus tag: MCCL_0433 Name: pflA Funciton: Pyruvate formate lyase activating enzyme
	MCCL_0434	pflB	Pyruvate formate lyase
	MCCL_0433	pflA	Pyruvate formate lyase activating enzyme
Position: -100 Score: 4.8 Sequence: TTTAAAACGTTTTCAT Locus tag: MCCL_1365 Name: pfkA Funciton: 6-phosphofructokinase Locus tag: MCCL_1364 Name: pykA Funciton: pyruvate kinase
	MCCL_1365	pfkA	6-phosphofructokinase
	MCCL_1364	pykA	pyruvate kinase
Position: -70 Score: 4 Sequence: TGTTTAGCGCTTTCAT Locus tag: MCCL_1890 Name: nupC Funciton: pyrimidine nucleoside transporter
	MCCL_1890	nupC	pyrimidine nucleoside transporter
Position: -34 Score: 5.1 Sequence: AAGAAAGCGTTTTCAT Locus tag: MCCL_1807 Name: nhaC Funciton: Na+/H+ antiporter NnaC homolog
	MCCL_1807	nhaC	Na+/H+ antiporter NnaC homolog
Position: -43 Score: 5 Sequence: ATGAAAACGTTTTCTT Locus tag: MCCL_0353 Name: mdxE Funciton: putative maltodexrtrin ABC transporter, substrate-binding protein Locus tag: MCCL_0354 Name: mdxF Funciton: putative maltodexrtrin ABC transporter, permease protein 1 Locus tag: MCCL_0355 Name: mdxG Funciton: putative maltodexrtrin ABC transporter, permease protein 2 Locus tag: MCCL_0356 Name: malR Funciton: maltose operon transcriptional repressor Locus tag: MCCL_0357 Name: MCCL_0357 Funciton: trehalosemaltose utilization protein Locus tag: MCCL_0358 Name: gfoA Funciton: putative glucose dehydrogenase A Locus tag: MCCL_0359 Name: gfoB Funciton: putative glucose dehydrogenase B Locus tag: MCCL_0360 Name: gfoI Funciton: putative sugar isomerase Locus tag: MCCL_0361 Name: msmX Funciton: putative maltodexrtrin ABC transporter, ATP-binding protein Locus tag: MCCL_0362 Name: malA Funciton: alpha-D-1,4-glucosidase
	MCCL_0353	mdxE	putative maltodexrtrin ABC transporter, substrate-binding protein
	MCCL_0354	mdxF	putative maltodexrtrin ABC transporter, permease protein 1
	MCCL_0355	mdxG	putative maltodexrtrin ABC transporter, permease protein 2
	MCCL_0356	malR	maltose operon transcriptional repressor
	MCCL_0357	MCCL_0357	trehalosemaltose utilization protein
	MCCL_0358	gfoA	putative glucose dehydrogenase A
	MCCL_0359	gfoB	putative glucose dehydrogenase B
	MCCL_0360	gfoI	putative sugar isomerase
	MCCL_0361	msmX	putative maltodexrtrin ABC transporter, ATP-binding protein
	MCCL_0362	malA	alpha-D-1,4-glucosidase
Position: -82 Score: 4.8 Sequence: TTGTAATCGATTTCAT Locus tag: MCCL_1800 Name: gudP Funciton: glucarate transporter
	MCCL_1800	gudP	glucarate transporter
Position: -93 Score: 4.6 Sequence: TTGGTAGCGTTTTCAA Locus tag: MCCL_0584 Name: gudB Funciton: NAD-specific glutamate dehydrogenase
	MCCL_0584	gudB	NAD-specific glutamate dehydrogenase
Position: -325 Score: 4.6 Sequence: AcGAAAGCGtTTaCAa Locus tag: MCCL_0405 Name: gntR Funciton: gluconate operon transcriptional repressor Locus tag: MCCL_0406 Name: gntK Funciton: gluconokinase Locus tag: MCCL_0407 Name: gntP Funciton: gluconate permease
	MCCL_0405	gntR	gluconate operon transcriptional repressor
	MCCL_0406	gntK	gluconokinase
	MCCL_0407	gntP	gluconate permease
Position: -82 Score: 4.7 Sequence: TTGTAAAGGCTTTCTT Locus tag: MCCL_0370 Name: glpT Funciton: glycerol-3-phosphate transporter Locus tag: MCCL_0371 Name: ugpC Funciton: SN-glycerol-3-phosphate transport ATP-binding protein ugpC homolog
	MCCL_0370	glpT	glycerol-3-phosphate transporter
	MCCL_0371	ugpC	SN-glycerol-3-phosphate transport ATP-binding protein ugpC homolog
Position: -133 Score: 4.7 Sequence: TTGACAACGTTTACAT Locus tag: MCCL_0891 Name: glpF Funciton: glycerol uptake facilitator Locus tag: MCCL_0892 Name: glpK Funciton: glycerol kinase Locus tag: MCCL_0893 Name: glpD Funciton: aerobic glycerol-3-phosphate dehydrogenase
	MCCL_0891	glpF	glycerol uptake facilitator
	MCCL_0892	glpK	glycerol kinase
	MCCL_0893	glpD	aerobic glycerol-3-phosphate dehydrogenase
Position: -28 Score: 3.9 Sequence: ATGAAAGTGTTCACAA Locus tag: MCCL_0452 Name: fruR Funciton: transcription repressor of fructose operon, DeoR family Locus tag: MCCL_0453 Name: fruB Funciton: fructose 1-phosphate kinase Locus tag: MCCL_0454 Name: fruA Funciton: PTS system fructose-specific IIABC component
	MCCL_0452	fruR	transcription repressor of fructose operon, DeoR family
	MCCL_0453	fruB	fructose 1-phosphate kinase
	MCCL_0454	fruA	PTS system fructose-specific IIABC component
Position: -62 Score: 4.7 Sequence: ATGAAAGCGTTATCTT Locus tag: MCCL_1408 Name: fhs Funciton: formyltetrahydrofolate synthetase
	MCCL_1408	fhs	formyltetrahydrofolate synthetase
Position: 0 Score: 4.4 Sequence: GTGAAAGCCATTACAT Locus tag: MCCL_1362 Name: citZ Funciton: citrate synthase Locus tag: MCCL_1361 Name: citC Funciton: isocitrate dehydrogenase
	MCCL_1362	citZ	citrate synthase
	MCCL_1361	citC	isocitrate dehydrogenase
Position: -36 Score: 4 Sequence: ATGTAAAGGCTTTATC Locus tag: MCCL_1008 Name: citB Funciton: aconitate hydratase
	MCCL_1008	citB	aconitate hydratase

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of CcpA in Macrococcus caseolyticus JCSC5402

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --